Gene detail

Gene detail information of Glyur000010s00000906

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G24810.2	0	Protein kinase superfamily protein
NR	XP_004515833.1	0	PREDICTED: uncharacterized aarF domain-containing protein kinase 1-like [Cicer arietinum]
COG	YP_448302.1	2.00E-37	protein kinase [Methanosphaera stadtmanae DSM 3091]
Swissprot	tr\|Q9ASX5\|Y5520_ARATH	5.00E-31	Uncharacterized aarF domain-containing protein kinase At5g05200, chloroplastic (Precursor)
trEMBL	tr\|G7JMM5\|G7JMM5_MEDTR	0	Ubiquinone biosynthesis protein coq-8, putative {ECO:0000313\|EMBL:AES91085.2}

Sequence

Transcript Sequence

>Glyur000010s00000906.1
CGAAGTGTTAACCATTTCTCTGGGAAAATAAGGAAGTGTATTTATTTACAGTACACACCTTTACTTGTGGTTCACTAGTTATTAAAAGAAGAAGAAAAAGAAAAAAGAGACTAGTAATAAGTAAGAAAGAAGAGAGAAATGAAAAACGTTGTTCCAAAGAAGAGGTGACAAAGAAAAGACACAAGTTATCCAAAATCCCGAAGAAGGAACGGTGGCAGCGACCTCCCGAAACAGAGNAGTTATAAGAGAAAGAGAGAGAGGGAGTATGGTGGTTTCTGAGCCACACTTTTGATTGAGAGTGTCGCACACAATATTTGATGTGCGACATCCTTTGCTGGGCGCTGCTATAGTTTGGTGTCATACGATAAGATACGATGTTGCCTCCTATGGTCGATCTCAACGATATAAAAGAGAAGGTCTCTTTTCAGTTGCGCCCTTGGCAACGCTCCTTCCAGTTCTGGGTGCGAGCCATTGATATTTACACCGGATACAAGGTGTTTCAACTGAGAGTGAATTTCGAGAAGGATGCTCAGAGGCAGGAAGCAATGTGGGAAAGACAGCACGAGCTTGCCGCCGATAAGATTTTCGCCATGTGCTCTGACCTCGGAGGTTTCTTCCTCAAGATTGCCCAAATTATAGGGAAGCCCGACTTGGCTCCGGCTGCATGGGTGAGAAGGCTTGTTACGCTGTGTGATCATGCTCCTGCAACCCCATTTCACACTGTCAGACATGTGCTAGAGAATGAGCTGGGACAACCTATTGATGATGTGTTCGACAGGTTTGATTTGGAGCCTCTTGGTTCTGCTTCAATTGCTCAGGTTCATAAAGCAAAACTGAAAGGTGACAAAGGGGATGTTGTTGTCAAGGTTCAACATCCTGGAGTTCAGGACCTGATGATGACAGATATCCATAACTTGCAAGCTTTTGCTTTGTACATGCAAAAAACAGATATAAAGTTCGATCTATATTCGGTGACAAAGGAAATGGAAAAACAGATTGGATATGAATTTGACTTCATAAGGGAGGCTGATGCAATGGAAAGGATTAGAAAGTTCTTAAGGGTCCTAGTTATGGAATATATTGATGGGATTCCAATAATGAACCTTGGTGATGAAATAGCAAAGAGAGGCATAAATCCTCGTGGTAAGGTTGCAGCTGTAGCAAAGCAGAAAATTCTTCAAAGCTTGACTCTAGCATACGGTCAAATGATTTTGAAAAGTGGGTTCTTCCATGCAGATCCTCATCCAGGAAATATCCTGATTTGTAAAGGATCAGAGGCAAACTATGGACAGGTTAAGGATCTCCCAGAGCAGTTGAGGCTTGGTTATGCTAATTTAGTTCTTGCAATTGCTGATGGTGACCCATTAGGAGCTTCGGAGAGCTATAGGGAGCTTGGTATAGATACCTTGAGCAAATGTGAAAATGAGCAACAAGAATTGTTTAAACTAGCACAGACAATGTTTGATACAAAATTGCCTCCTGGGGTGGTAATGCTGCAACCATTCGCGGAGGAATCTTCAATAAAAAAAGTTGGTGTTCAGGCTTTCCCAGAAGAACTGTTTTCAGTACTTCGGACGGTGCATCTTCTGAGGGGACTTAGCGTTGGACTTGGAATCAATTATTCTTGTGCAGAACAGTGGAGACCCATTGCTGAAGAAGCTTTAGCTCAAGCTGGAAGACTTAAAGGTAAGGATGTTAAGCGCAGAGGTAGGAAACGCGGTTTAGTAAAAACGTTGTTTTGGAGAGACTAAATAGGTAGGTATGGATCAATCTATTTGTGTCTAGTTTGTTGATTAACTGGTCAATTCTTTGTATGAACATCGAAGAAAGGTAAATTCAAATTATCTCTTCTCAATATGGCATCTAAAGTTTGACATTGATGGCAATCGCAATTAGATGTTGCGGTGCCTCAGCAAGTAGTTTTCGGAATTTTAAAATATTTTGTACTTGACATGTATTTTAGACAAGACTAATTTACATTATTATTATTTGAAATTTTGGAAAAATGTTTAATGACATTATACAGTCTGTATATTTTAGCCCGCAACATGAACTTTGCTATGGTTAAGTTGACGACTATTTGAAAAGGTGTCGTTCTTCTTGCATGCCAATTACTCAAAAGGGGAAAAAAAGAGATAAACTAATTAAAACGAAATTTCGATACTCAATATAATATATGAATA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00010	141140	149006	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function
GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000010s00000906.1	PF03109.11	ABC1	123	231	7.80E-33
Glyur000010s00000906.2	PF03109.11	ABC1	123	231	7.10E-33

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	3.743
SRR1783600	control	3.766
SRR1783602	moderate drought stress	4.016
SRR1811619	moderate drought stress	3.948

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	6.056
DRR006520	Root Summer glycyrrhizin high producing strain	6.200
DRR006521	Root Winter glycyrrhizin high producing strain	3.829
DRR006522	Root Winter glycyrrhizin high producing strain	3.706
DRR006523	Root Summer glycyrrhizin low producing strain	6.283
DRR006524	Root Summer glycyrrhizin low producing strain	6.183
DRR006525	Leaf Summer glycyrrhizin high producing strain	9.530
DRR006526	Leaf Summer glycyrrhizin high producing strain	9.511

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	8.182
SRR2868004	Drought Stress (root)	7.069
SRR2967015	Control (root)	7.339

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	14.775
SRR9715740	Leaf	18.123
SRR9715741	Leaf	12.956
SRR9715739	Root	1.597
SRR9715742	Root	4.039
SRR9715743	Root	3.077

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	6.101
SRR8749028	MeJA induced 9h	3.741
SRR8749029	MeJA induced 9h	3.824
SRR8749030	Uninduced	3.272
SRR8749031	Uninduced	1.432
SRR8749032	Uninduced	2.829

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	11.834
SRR8400027	Control - Root	12.110