Gene detail

Gene detail information of Glyur000010s00000885

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G24760.1	2.00E-125	alpha/beta-Hydrolases superfamily protein
NR	XP_003525528.1	0	PREDICTED: alpha/beta hydrolase domain-containing protein 17C-like [Glycine max]
COG	YP_724418.1	2.00E-50	hypothetical protein Tery_5033 [Trichodesmium erythraeum IMS101]
trEMBL	tr\|I1K067\|I1K067_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA05G02840.1}

Sequence

Transcript Sequence

>Glyur000010s00000885.1
ATGGGCGGTGTTACGTCTTCAATGGCAGCGAAATTGGCATTCTTCCCGCCAAACCCACCATCGTACAAGGTGGTGAAGGAGGCAGGGACAGGGGTGTTGGCGTTGGAGCCTTTCCCTCAGCGNGAGAACGTGGAAGTGGTGAAGTTCACAACTCGTCGTGGAGCTGAGATCGTGGGTGTGTATGTTAGACACCCAATGGCCAAATCCACCCTCCTTTACTCGCACGGGAATGCCGCTGATATCGGTCAGATGTACGACCTCTTCCTCGAGTTGAGCCTCAACTTGCGTGTCAATCTCTTGGGATATGATTACTCCGGCTATGGACAGTCATCAGGAAAGCCAAGTGAGAATAATACTTACGCTGACATTGAAGCTGCATATAAGTATCTTGAAGAGAAGTATGGTACTAAACAGGAAGACATTATCCTTTATGGTCAATCTGTTGGAAGTGGTCCTACTTTGGATCTTGCTGCCCGTTTACCCCGACTTAGGGCTGTTGTTCTCCACAGTCCTATACTATCCGGGTTGAGAGTCATGTACCCTGTGAAACGGACATACTGGTTTGACATTTACAAGAACATTGATAAAATTCCATTGGTGAAATGCCCAGTGTTAGTCATTCATGGAACCGCTGATGAGGTTGTTGATTGCTCTCATGGCAAGCAGTTGTGGGAACTTTGTCAAGAGAAATATGAACCTCTATGGCTCAAAGGAGGGAACCACTGTAATCTGGAAGTCTATCCGGAATACCTTCAACATCTCCAAAAATTCATATCAACGATAGAGAAGTCACCATCACAAAAACCAAGTTTTTGGAGAAGCATAGAGAGAATTCAAGAAGCCAGGAGAAGTATTGATTGTTTTGAAGCTCCAAGGATGAGTACTGATCAGAGGGACAAACCAAGGAAAAGCCCTGATTGGAAAGACAACCCGAAANTTCATGCTTACAAATTCAATAATGTCGAAAAATTGGAGAAGTCAAGGATCTCTTTTGACCTGATGGGGAGATCTCAAAGAAACGTTGAGCGCCATGATAAATCCCGAAAAAGTGTTGATGTTCNGCTTGGGAGGGCAAGGAAGAGCATTGATTGGCTGGATAGAATTCGAGCTCGCTGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00010	30892	34160	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000010s00000885.1	PF12695.2	Abhydrolase_5	70	242	1.70E-27

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.261
SRR1783600	control	0.260
SRR1783602	moderate drought stress	0.496
SRR1811619	moderate drought stress	0.466

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.583
DRR006520	Root Summer glycyrrhizin high producing strain	0.761
DRR006521	Root Winter glycyrrhizin high producing strain	0.803
DRR006522	Root Winter glycyrrhizin high producing strain	0.690
DRR006523	Root Summer glycyrrhizin low producing strain	0.200
DRR006524	Root Summer glycyrrhizin low producing strain	0.299
DRR006525	Leaf Summer glycyrrhizin high producing strain	1.088
DRR006526	Leaf Summer glycyrrhizin high producing strain	1.074

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	5.221
SRR2868004	Drought Stress (root)	5.032
SRR2967015	Control (root)	5.113

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	2.811
SRR9715740	Leaf	1.600
SRR9715741	Leaf	1.190
SRR9715739	Root	0.000
SRR9715742	Root	0.166
SRR9715743	Root	0.127

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	63.438
SRR8749028	MeJA induced 9h	18.840
SRR8749029	MeJA induced 9h	15.344
SRR8749030	Uninduced	0.962
SRR8749031	Uninduced	0.394
SRR8749032	Uninduced	0.289

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	2.625
SRR8400027	Control - Root	3.171