Gene detail information of Glyur000009s00001497 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G20570.1 | 9.00E-23 | GBF's pro-rich region-interacting factor 1 |
| NR | XP_007149809.1 | 7.18E-75 | hypothetical protein PHAVU_005G100700g [Phaseolus vulgaris] |
| Swissprot | tr|Q9SIV3|GLK1_ARATH | 5.00E-31 | Transcription activator GLK1 |
| trEMBL | tr|V7BXL1|V7BXL1_PHAVU | 3.00E-75 | Uncharacterized protein {ECO:0000313|EMBL:ESW21803.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00009 | 710660 | 713284 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 13.790 |
| SRR1783600 | control | 13.159 |
| SRR1783602 | moderate drought stress | 24.252 |
| SRR1811619 | moderate drought stress | 21.098 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.549 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.597 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.207 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.452 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 9.722 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 11.914 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 141.409 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 142.692 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.212 |
| SRR2868004 | Drought Stress (root) | 0.796 |
| SRR2967015 | Control (root) | 0.359 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 74.862 |
| SRR9715740 | Leaf | 73.134 |
| SRR9715741 | Leaf | 69.920 |
| SRR9715739 | Root | 1.570 |
| SRR9715742 | Root | 4.218 |
| SRR9715743 | Root | 3.485 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.385 |
| SRR8400027 | Control - Root | 3.843 |