Gene detail information of Glyur000009s00001485


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G44240.20aminophospholipid ATPase 2
NRKEH39170.10phospholipid-transporting ATPase-like protein [Medicago truncatula]
COGYP_007079984.14.00E-23P-type ATPase, translocating [Pleurocapsa sp. PCC 7327]
Swissprottr|P98205|ALA2_ARATH0Phospholipid-transporting ATPase 2
trEMBLtr|A0A072VLY5|A0A072VLY5_MEDTR0Phospholipid-transporting ATPase-like protein {ECO:0000313|EMBL:KEH39170.1}

Sequence

Transcript Sequence
Protein Sequence


Location information (JBrowse)

ScaffoldStartEndStrand
Scaffold00009634473650334-


Gene family

Gene familysubfamily
----


KEGG pathway

KOEnzymeEnzyme IDpathwaymapID
----------


Gene Ontology

biological_process

GO:0015914  phospholipid transport


cellular_component

GO:0016021  integral component of membrane


molecular_function

GO:0000166  nucleotide binding

GO:0000287  magnesium ion binding

GO:0004012  phospholipid-translocating ATPase activity

GO:0005524  ATP binding

"


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000009s00001485.1PF00702.21Hydrolase204065.90E-16
Glyur000009s00001485.2PF00122.15E1-E2_ATPase733398.80E-14
Glyur000009s00001485.2PF12710.2HAD3737298.30E-14
Glyur000009s00001485.3PF12710.2HAD203763.60E-14


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control9.841
SRR1783600control9.973
SRR1783602moderate drought stress9.356
SRR1811619moderate drought stress9.215

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain9.591
DRR006520Root Summer glycyrrhizin high producing strain9.454
DRR006521Root Winter glycyrrhizin high producing strain15.890
DRR006522Root Winter glycyrrhizin high producing strain15.485
DRR006523Root Summer glycyrrhizin low producing strain9.396
DRR006524Root Summer glycyrrhizin low producing strain9.324
DRR006525Leaf Summer glycyrrhizin high producing strain9.339
DRR006526Leaf Summer glycyrrhizin high producing strain9.525

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress (root)30.863
SRR2868004Drought Stress (root)34.414
SRR2967015Control (root)28.850

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leaf22.171
SRR9715740Leaf19.157
SRR9715741Leaf25.981
SRR9715739Root1.398
SRR9715742Root10.022
SRR9715743Root9.923

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h17.915
SRR8749028MeJA induced 9h40.131
SRR8749029MeJA induced 9h18.352
SRR8749030Uninduced27.743
SRR8749031Uninduced31.962
SRR8749032Uninduced17.808

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment - Root26.549
SRR8400027Control - Root25.397

© 2021 Resource Institute for Chinese & Ethnic Materia Medica, Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved