Gene detail

Gene detail information of Glyur000009s00001473.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G04960.1	5.00E-179	Concanavalin A-like lectin protein kinase family protein
NR	KEH39141.1	0	lectin receptor kinase [Medicago truncatula]
COG	YP_004571825.1	5.00E-19	serine/threonine protein kinase [Microlunatus phosphovorus NM-1]
Swissprot	tr\|O49445\|LRK72_ARATH	0	Probable L-type lectin-domain containing receptor kinase VII.2 (Precursor)
trEMBL	tr\|A0A072VC03\|A0A072VC03_MEDTR	0	Lectin receptor kinase {ECO:0000313\|EMBL:KEH39141.1}

Sequence

Transcript Sequence

>Glyur000009s00001473.1
CGAGAAGAGAGATAAAAAGAGATGACAGGTATTGAATTAGTGGTAGTGTGCATATACGTGTTCAATGAATATAGTCTCACAAAAAATTAGCATAAGATTTTCATGTTTCAGTGCAGCATAAACCAGGCTTAGGCACTTCCGCACTTGCAAGTTAAAACATAAAAGGAACCAACCATCTTCCTCCTTTCTCATCATTCATTAATCTCTTCTCTTGTGCTAACTATAATGTCCCATCTTTCCTTTTTCTTCCTCCTCCTCATCCTTAACACAACAACTCTTCTAGTTTTGATCAGTTCAGTGTCAGCAACTGAATTTGTCTACAACANAAACTTCAACTCAACCAACATAAAGCTTTATGGGAATGCCACAATTGATCAAAACTCCATTCTCACTCTTACCAACCAAACTTTCTTTTCCATTGNCCGTGCCTTTTACCCTCACACTGTGCCCATGATGAAAACACAAAACTCTTCTTCCACCCCACTTCCCTTTGCAACCTCTTTCATCTTCTCCATTGCTCCTTGCAAGAACTTCCCAATTGCTCATGGTTTTGCTTTCGTTTTCTCACCTGTTATGGCCATAAATGGAGCACTCTCTGGGAATTATTTAGGACTTTTCAACCGCTCCTCTTCAGATGGTGAGGAACTGGAGAAGCTGAAACTGGCTAGTGGCCAGAACTATCAGGTTTGGATTGAGTTTGAGAATTCACATATTAATGTTACTATGGCACCAGCAGGGAAAAGAAAGCCTCAAAGGCCTTTGATTAGTAAGCCTATTAACCTTTCTGTTGTTTTGTGGGATGAGATGTATGTGGGGTTTTCTGGAGCCACAGGGAGAATGGTGGACANTTGTAGAATCTTGGGTTGGAGTTTTAGCCATTCAAATTTTTCAATTGGTGATGCTTTGAATACCAAACACTTGCCCATGTTTGTGCATCCAACAAAGACAGTGATATATAGATCTAAAGGATTCATTATCAGTGTCATTTTTGGTGCACTTTTTGTTGTCAGTGGTTGCTGCACTCTTGTGTTCTTCATTTTGTATAGAACCAGAAAGGAAGAGGAAGATGAAAAGATTGAGGATTGGGAATTGGAGTATTGGCCACATAGGATTAGCTATCAGGAGATCTGTGATGCAACAAGTGGATTCTCTGAAGAGAGAGTGATTGGGATTGGAACAAGTGGGAAAGTATACAGAGGGGTTCTGAAAGGAGTAGAAGTTGCAGTGAAGAGGTTCAACCATGACACTCAGCATGGAATGAAGAAGTTTCTGGCAGAGATTTCAAGCCTAGGCAGAATGAAACACAGAAACCTTGTGGGTTTCAGAGGATGGAGCAAAAGAAAAGGAGGAAAATTGATACTTGTTTATGATTACATGGAGAATGAGAGCTTGGACAAGAGGATCTTTGAGTGTGAAGAGACCAAACTACTGAACTGGGAAGAAAGAATAAGAGTTCTAGAAAATGTGGCTTGTGGGGTTTTATATCTACATGAAGGTTGGGAGGTTGAGGTGTTGCATAGAGACATCAAAGCAAGCAATGTGCTACTTGACAAGGACATGAATGCAAGGTTGGGGGATTTTGGTCTTGCCAGGTTGCATCATCAACAGGGACACGTGGCATCTTCTGACACAACAAGGGTAATAGGGACTCTTGGGTACATGGCACCAGAAATAGTCAGAGTTGGAAGACCATCAACTGCAACTGATGTGTATAGTTTTGGAGTAGTTGTTTTAGAAATGGNATGTGGGAGAAGGCCCATTGTGGTGAATGAGCCACCATTGGTTGAATGGGTAGTTTCACTATTGGAGAAAGGGGAATTGGGTTGTGCTATTGATGAGCGTTTGAAGGGTCAAGGAGGGTATAGCGGTGAGGAAGGTGAGAGAATGCTTCACTTGGGTTTGTTATGTGCAAGTTTTGACCCTGGTGTTAGGCCAACAATGAGGCAGGTGGTGAAAGCATTGGAGGGAATAAAATGCAATGAGTGTAACTGTAGTGGAGATTGCATTATTCATGAGGGTCTTATTGGGAAAATAAACTCAGCAGCATCATGGTCTAGGAGTTCTACAAGTTCTGCCCCACTTGTAAATTTTCCTACCCTTGATGATATTTTACCGTCCTCCAGATTTTTNTCCTCAGCATCTTTGAGTGTGTCTTATCCCAGCCTCAAGCCAGATACGGATTGTGTCTCAGAAGGAAGTCCCATGCCAATGCCTCCACTTAAGCTCCTTGTCATTCTTCTTCTCCACACTGTAACCATTCTGAGTTCTGTTTCCANTACCGAATTTGTCTATAATACAGACTTCAACTCCACAAACATTCTCCTATCTGGACATGGCACTATTCAGACCTCCATTCTGACTCTCACCAATGGCAGTTTCTTCTCCACAGGCCGTGCTTTTTACCCTAAAAAAATACTTACCAAACCAGCCAACTCTTCCACCCTTCTCCCCTTTGCAACCTCCTTCATTTTCTCTATTGCCCCTATCAAAAACTTTATTACAGGACATGGCTTTGCCTTCCTATTCACACCTTCAAGTGGCGTAAACGGCACGACCTCAGCTGAGTATCTTGGTCTTTTCAATCTCAGCAATGAAGGTAATCCTAAGAACCATGTTGTTGGAGTTGAGTTCGATGTAGTTAAAAATGAAGAAGAGTTCAAGGATATAAATGACAACCATGTTGGTGTTGACATAAACTCACTTATATCCTCAACTTCACATGAGGCTGGCTATTGGGGTGGGAAAGATGACAAGGAATTTAAGGTGTTGCAGATGAAAAACGGAGAAAATTATCAGGTATGGATTGAATTTATGCACTCCCAGCTAAACGTTACGGTGGCTCGGGCAGGACAAAAGAGGCCTCGAGTGCCTATTATCAGTGAGAATGTTAACCTTTCAGGGGTTCTTGCAGAAGAAACATATGTTGGGTTCTGTGCAGCCACTGGTAAGGTCATAGACAGTGTCAAGATCCTTGCTTGGAGCTTTAGTAATTCAAATTTTTCAATTGGTGATGCCTTAGTGACAGACAACTTGCCTTCATTTGTTCTTCACAAAGGGTGGTTTTCTGGAGCACGAGCTATAGCTGTAGGAGTCACCAGTGTTTTCTGTGTGTTAATCATCGGTTGTGGTTACATAGTGTTTTTCATTCTCCGTAGGGGGAACAAGCCAGAGGAAGAAATTGAAGACTGGGAATTGGAGTATTGGCCACATAGGATTGGTTTCAGTGAGATTGATGCAGCAACAAGGGGGTTCTCTGAAGAGAATGTGGTTGCTATAGGAGGCAACGGGAAGGTATATAAAGGGTTATTACAAGGAGTAGAAGTTGCAGTCAAGAGAATCCCTCAAGAGAGACAACAAGGGATGAGAGAATTTTTGGCTGAGGTTTCAAGCCTAGGCAGGATGAAACACAGAAATTTGGTACAATTGAGAGGTTGGTCCAAAAAAGACAAGGGAAACTTGATTCTGGTTTATGACTTCATGAGTAATGGAAGTTTAGACAAAAGGATCTTTGAGTGTGAAGAGGGAAAGATGCTAACTTGGGAAGAGAGGATTGGAGTTTTGAAAAATGTAGCTGCAGGGGTTCTATACATGCATGAGGGTTGGGAAGTTAAGGTCTTGCATAGGGACATAAAAGCCAGCAATGTTCTACTTGACAAGGACATGAATGCTAGGTTGGGGGATTTTGGATTGGCTAGTATGCATGATCACCATGGAGAAGTGGACAGCACAACAAGAATACTAGGGACAGTAGGATACATTGCTCCGGAAGTACTTCGAACTGGAACGGTATCGACTATGTCTGATGTGTTTGGTTTTGGAACATTGGTGTTGGAGGTGATTTGTGGGAGAAGACCAATAGAAGAACACATGCCAGGGCTAATTGAATGGGTGAAGTCCCTAATGGTGCTTGGCCAATTGCACAATGCTGTTGATGAAAGGTTGAAGGCTAAGGGAGGATACAACATTGAGGAAGCTGAGAGATTGCTTCATTTGGGTTTACTGTGTTCAAATTCAGGCCCTAGTGTTAGACCAACAATGAGGCAGGTTGTGAAAATTCTGGANGGAGAAATGGACAGTGTTGAGTCTGATGAAGAAAACATGGAGATGAGTTTGCTTGCAAAAAAAATAAAATCAGCTGCAATGTGGTCTAAAACTGAATGTGCTCACCCTACTTTTGAAGAAATTAGTATGTTCAGTTATAATTCTAAGACATCTACAAGTGGCTCAGGTACCATTCCAGNATCAGAATCAGATATCATTCGGGAAGGAAGGTAA

Protein Sequence

>Glyur000009s00001473.1
MSHLSFFFLLLILNTTTLLVLISSVSATEFVYNXNFNSTNIKLYGNATIDQNSILTLTNQTFFSIXRAFYPHTVPMMKTQNSSSTPLPFATSFIFSIAPCKNFPIAHGFAFVFSPVMAINGALSGNYLGLFNRSSSDGEELEKLKLASGQNYQVWIEFENSHINVTMAPAGKRKPQRPLISKPINLSVVLWDEMYVGFSGATGRMVDXCRILGWSFSHSNFSIGDALNTKHLPMFVHPTKTVIYRSKGFIISVIFGALFVVSGCCTLVFFILYRTRKEEEDEKIEDWELEYWPHRISYQEICDATSGFSEERVIGIGTSGKVYRGVLKGVEVAVKRFNHDTQHGMKKFLAEISSLGRMKHRNLVGFRGWSKRKGGKLILVYDYMENESLDKRIFECEETKLLNWEERIRVLENVACGVLYLHEGWEVEVLHRDIKASNVLLDKDMNARLGDFGLARLHHQQGHVASSDTTRVIGTLGYMAPEIVRVGRPSTATDVYSFGVVVLEMXCGRRPIVVNEPPLVEWVVSLLEKGELGCAIDERLKGQGGYSGEEGERMLHLGLLCASFDPGVRPTMRQVVKALEGIKCNECNCSGDCIIHEGLIGKINSAASWSRSSTSSAPLVNFPTLDDILPSSRFXSSASLSVSYPSLKPDTDCVSEGSPMPMPPLKLLVILLLHTVTILSSVSXTEFVYNTDFNSTNILLSGHGTIQTSILTLTNGSFFSTGRAFYPKKILTKPANSSTLLPFATSFIFSIAPIKNFITGHGFAFLFTPSSGVNGTTSAEYLGLFNLSNEGNPKNHVVGVEFDVVKNEEEFKDINDNHVGVDINSLISSTSHEAGYWGGKDDKEFKVLQMKNGENYQVWIEFMHSQLNVTVARAGQKRPRVPIISENVNLSGVLAEETYVGFCAATGKVIDSVKILAWSFSNSNFSIGDALVTDNLPSFVLHKGWFSGARAIAVGVTSVFCVLIIGCGYIVFFILRRGNKPEEEIEDWELEYWPHRIGFSEIDAATRGFSEENVVAIGGNGKVYKGLLQGVEVAVKRIPQERQQGMREFLAEVSSLGRMKHRNLVQLRGWSKKDKGNLILVYDFMSNGSLDKRIFECEEGKMLTWEERIGVLKNVAAGVLYMHEGWEVKVLHRDIKASNVLLDKDMNARLGDFGLASMHDHHGEVDSTTRILGTVGYIAPEVLRTGTVSTMSDVFGFGTLVLEVICGRRPIEEHMPGLIEWVKSLMVLGQLHNAVDERLKAKGGYNIEEAERLLHLGLLCSNSGPSVRPTMRQVVKILXGEMDSVESDEENMEMSLLAKKIKSAAMWSKTECAHPTFEEISMFSYNSKTSTSGSGTIPXSESDIIREGR

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00009	541954	548182	-

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.11.1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function

GO:0004672 protein kinase activity

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

GO:0030246 carbohydrate binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000009s00001473.1	PF00139.14	Lectin_legB	27	137	1.30E-21
Glyur000009s00001473.1	PF00139.14	Lectin_legB	142	217	2.70E-18
Glyur000009s00001473.1	PF00069.20	Pkinase	310	577	3.20E-45
Glyur000009s00001473.1	PF00139.14	Lectin_legB	685	921	7.00E-66
Glyur000009s00001473.1	PF00069.20	Pkinase	1012	1275	3.30E-41

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.928
SRR1783600	control	0.932
SRR1783602	moderate drought stress	2.780
SRR1811619	moderate drought stress	2.765

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	4.993
DRR006520	Root Summer glycyrrhizin high producing strain	4.811
DRR006521	Root Winter glycyrrhizin high producing strain	2.013
DRR006522	Root Winter glycyrrhizin high producing strain	2.051
DRR006523	Root Summer glycyrrhizin low producing strain	10.252
DRR006524	Root Summer glycyrrhizin low producing strain	10.030
DRR006525	Leaf Summer glycyrrhizin high producing strain	6.563
DRR006526	Leaf Summer glycyrrhizin high producing strain	6.386

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	1.993
SRR2868004	Drought Stress (root)	5.708
SRR2967015	Control (root)	5.671

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	7.218
SRR9715740	Leaf	9.610
SRR9715741	Leaf	6.863
SRR9715739	Root	0.701
SRR9715742	Root	9.103
SRR9715743	Root	6.564

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.480
SRR8749028	MeJA induced 9h	0.844
SRR8749029	MeJA induced 9h	0.376
SRR8749030	Uninduced	2.491
SRR8749031	Uninduced	1.397
SRR8749032	Uninduced	0.736

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	5.628
SRR8400027	Control - Root	7.267