Gene detail information of Glyur000009s00001443 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G14830.1 | 2.00E-43 | Regulator of Vps4 activity in the MVB pathway protein |
| NR | XP_006592837.1 | 0 | PREDICTED: uncharacterized protein LOC102669589 isoform X1 [Glycine max] |
| trEMBL | tr|I1LUF3|I1LUF3_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G33010.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00009 | 378139 | 381472 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000009s00001443.1 | PF03398.9 | Ist1 | 22 | 183 | 3.00E-48 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.872 |
| SRR1783600 | control | 3.930 |
| SRR1783602 | moderate drought stress | 5.866 |
| SRR1811619 | moderate drought stress | 5.667 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.287 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.899 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.221 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.353 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 12.192 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 12.565 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.967 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 9.015 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 13.513 |
| SRR2868004 | Drought Stress (root) | 24.549 |
| SRR2967015 | Control (root) | 24.704 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 14.157 |
| SRR9715740 | Leaf | 35.700 |
| SRR9715741 | Leaf | 25.636 |
| SRR9715739 | Root | 1.265 |
| SRR9715742 | Root | 8.995 |
| SRR9715743 | Root | 6.441 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.526 |
| SRR8749028 | MeJA induced 9h | 1.324 |
| SRR8749029 | MeJA induced 9h | 0.090 |
| SRR8749030 | Uninduced | 2.406 |
| SRR8749031 | Uninduced | 0.350 |
| SRR8749032 | Uninduced | 0.012 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 12.766 |
| SRR8400027 | Control - Root | 10.942 |