Gene detail

Gene detail information of Glyur000009s00001436

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G03420.1	2.00E-111	Protein of unknown function (DUF789)
NR	XP_004487303.1	0	PREDICTED: uncharacterized protein LOC101500038 isoform X1 [Cicer arietinum]
trEMBL	tr\|I1M3V0\|I1M3V0_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA13G37500.1}

Sequence

Transcript Sequence

>Glyur000009s00001436.1
ATGATTTTTNATAAAGGGTCAATGCATTCTAACCTTGACTGCTTTGTCCGGTGTACCACCCCGGTGGTTCAATCCCAGTTTCTTCCAAAGTCCGAGATTACGAACCTGAACCGTTTGTGGCATCCATGGGAGAGAGAAACAGTGGAATATTTCACCTTGGGTGATCTGTGGAATTGCTACGACGAATGGAGTGCTTATGGGGCAGGAGTTCCAATCTCCTTGACCAGTGGGGAGACACTTGTGCAGTACTACGTGCCTTACCTCTCTGCAATTCAGATATTCACTAGCAATAGTTTCAGGGAAGAGACAGAGTCAGGTGACTGTGAGACAAGGGATTCGTACAGTGATTCTTTCAGCGATGAGAGTGAGTGTGATAAGCTATGGAGGTGGGATGGAACTTCATCAGAAGAGGGAGGGTATGAGCAAGATTGTCTATGGCATTTGAATGACAGATTGGGTCACCTCTATTGCCAGTATTTTGAGAGATCAAATCCATATGGGAGAGTTCCTCTAATGGATAAGATTACTGGGTTAGCTCAAAGATACCCAGGGTTGATGTCATTAAGAAGCGTAGATCTTTCGCCAGCAAGTTGGATGGCAGTTGCTTGGTACCCAATATATCATATCCCCATGGGAAGAACAATCAAAGATCTTTCCACATGCTTCCTCACTTACCACACCCTTTCATCTTCATTTCAAGGCATGGACCTTGACGATGATATTGAGGGTGGGCAAGAGAAGAAAAAGGAAGGGGAAGGGATATCTCTGGCAGCATTTGGTTTGGCAACGTACAAGATGCAAGGGGGGAACGTGTGGGTCGCAGGCAATCGTGGTCGGGACCAAGAGAGACTTGTGTCACTATTGAGCGTGGCAGACTCATGGTTGAAGCAACTAAGGGTTCAGCATCATGACTTTAATCACTTCATGGGCATTCGGCATGGCTAAAATGGATTTTTTATTAACCCCACATGCACTACTCTACAAAGAAACTCGCACTTGCACAAAGCATGTCGATGGCTAGCTAAATATCCTCCTTTTTTTCTCGGATCTTTGGTTTTTTATGCACTTTCTTGGACCATTAATTGTGCCTTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTTTTATTGAGGGAGTGTGAGGAATATTGAGGATATATGTATGTAGTAAAGTTGGTACTTAATTAACCCTTGAGAGCATTTTAGGACCAACCCTCGTGAGAGATTCCAAGCAAAATTAAAAGGGGTGATTGATGAATTGACTCCTTTCTCAATTGCCTATATATATATATGATCAAGAGGTAATTGTATGTAGAGAGATAGGTAGGGGGAGAGGACTGAGGAGGGGGGTCAGAGAGGGACAGAGTTGAGAGGCTATAGAACTTTGAGCTTTGATTGTGTATAACTTGCTATTGACCATAATGGTTAATGAATCGGATGAATGATGTGGAAGCAGCTTAATTGCACA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00009	352527	355702	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000009s00001436.1	PF05623.7	DUF789	10	308	2.60E-105

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	5.669
SRR1783600	control	5.695
SRR1783602	moderate drought stress	6.554
SRR1811619	moderate drought stress	6.253

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	9.273
DRR006520	Root Summer glycyrrhizin high producing strain	8.409
DRR006521	Root Winter glycyrrhizin high producing strain	4.196
DRR006522	Root Winter glycyrrhizin high producing strain	4.072
DRR006523	Root Summer glycyrrhizin low producing strain	7.628
DRR006524	Root Summer glycyrrhizin low producing strain	7.677
DRR006525	Leaf Summer glycyrrhizin high producing strain	16.888
DRR006526	Leaf Summer glycyrrhizin high producing strain	16.527

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	9.260
SRR2868004	Drought Stress (root)	16.936
SRR2967015	Control (root)	24.939

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	10.496
SRR9715740	Leaf	23.028
SRR9715741	Leaf	12.144
SRR9715739	Root	9.112
SRR9715742	Root	14.164
SRR9715743	Root	11.712

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	46.260
SRR8749028	MeJA induced 9h	288.568
SRR8749029	MeJA induced 9h	111.250
SRR8749030	Uninduced	74.522
SRR8749031	Uninduced	180.796
SRR8749032	Uninduced	170.479

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	12.970
SRR8400027	Control - Root	16.522