Gene detail information of Glyur000009s00001429 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G03410.2 | 2.00E-114 | Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein |
| NR | KEH39092.1 | 0 | peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein [Medicago truncatula] |
| trEMBL | tr|A0A072VBB5|A0A072VBB5_MEDTR | 0 | Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein {ECO:0000313|EMBL:KEH39092.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00009 | 321832 | 325660 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000009s00001429.1 | PF04117.7 | Mpv17_PMP22 | 257 | 322 | 9.60E-19 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.047 |
| SRR1783600 | control | 4.178 |
| SRR1783602 | moderate drought stress | 4.806 |
| SRR1811619 | moderate drought stress | 4.824 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.365 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.304 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 7.299 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 7.050 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 13.009 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 13.169 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 17.966 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 17.656 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.181 |
| SRR2868004 | Drought Stress (root) | 8.105 |
| SRR2967015 | Control (root) | 10.386 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 33.168 |
| SRR9715740 | Leaf | 55.989 |
| SRR9715741 | Leaf | 37.412 |
| SRR9715739 | Root | 3.792 |
| SRR9715742 | Root | 7.187 |
| SRR9715743 | Root | 6.658 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 17.978 |
| SRR8749028 | MeJA induced 9h | 24.498 |
| SRR8749029 | MeJA induced 9h | 27.921 |
| SRR8749030 | Uninduced | 32.961 |
| SRR8749031 | Uninduced | 13.561 |
| SRR8749032 | Uninduced | 11.845 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 8.662 |
| SRR8400027 | Control - Root | 9.932 |