Gene detail information of Glyur000009s00001407 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G28240.1 | 2.00E-07 | Wound-responsive family protein |
| NR | XP_004487329.1 | 2.66E-41 | PREDICTED: uncharacterized protein LOC101507632 [Cicer arietinum] |
| trEMBL | tr|A0A072VAJ9|A0A072VAJ9_MEDTR | 5.00E-37 | Wound-responsive family protein {ECO:0000313|EMBL:KEH39064.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00009 | 192506 | 192736 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000009s00001407.1 | PF12609.3 | DUF3774 | 1 | 75 | 1.90E-13 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 437.728 |
| SRR1783600 | control | 453.710 |
| SRR1783602 | moderate drought stress | 541.995 |
| SRR1811619 | moderate drought stress | 555.712 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 370.766 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 362.302 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 359.568 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 365.133 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 164.265 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 169.297 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 107.920 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 117.898 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 377.927 |
| SRR2868004 | Drought Stress (root) | 693.295 |
| SRR2967015 | Control (root) | 683.768 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 71.817 |
| SRR9715740 | Leaf | 61.273 |
| SRR9715741 | Leaf | 121.478 |
| SRR9715739 | Root | 36.627 |
| SRR9715742 | Root | 37.884 |
| SRR9715743 | Root | 35.667 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 195.562 |
| SRR8749028 | MeJA induced 9h | 142.094 |
| SRR8749029 | MeJA induced 9h | 103.063 |
| SRR8749030 | Uninduced | 74.325 |
| SRR8749031 | Uninduced | 62.375 |
| SRR8749032 | Uninduced | 148.664 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 477.185 |
| SRR8400027 | Control - Root | 325.709 |