Gene detail information of Glyur000009s00001403 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G10270.1 | 2.00E-20 | Wound-responsive family protein |
| NR | NP_001239762.1 | 3.07E-50 | uncharacterized protein LOC100814873 [Glycine max] |
| trEMBL | tr|C6TB07|C6TB07_SOYBN | 1.00E-50 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G32725.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00009 | 171967 | 172245 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000009s00001403.1 | PF12609.3 | DUF3774 | 13 | 91 | 1.00E-31 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 83.941 |
| SRR1783600 | control | 86.849 |
| SRR1783602 | moderate drought stress | 41.654 |
| SRR1811619 | moderate drought stress | 44.849 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 141.545 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 139.563 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1727.775 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1696.436 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.680 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.944 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 44.213 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 48.979 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 26.091 |
| SRR2868004 | Drought Stress (root) | 33.921 |
| SRR2967015 | Control (root) | 28.961 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 37.273 |
| SRR9715740 | Leaf | 75.465 |
| SRR9715741 | Leaf | 64.161 |
| SRR9715739 | Root | 6.707 |
| SRR9715742 | Root | 19.850 |
| SRR9715743 | Root | 16.257 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 50.140 |
| SRR8749028 | MeJA induced 9h | 173.820 |
| SRR8749029 | MeJA induced 9h | 101.097 |
| SRR8749030 | Uninduced | 15.031 |
| SRR8749031 | Uninduced | 29.264 |
| SRR8749032 | Uninduced | 45.389 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 141.993 |
| SRR8400027 | Control - Root | 138.388 |