Gene detail information of Glyur000009s00001402 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G10270.1 | 5.00E-10 | Wound-responsive family protein |
| NR | AFK46536.1 | 1.24E-31 | unknown [Lotus japonicus] |
| trEMBL | tr|I3T1Z4|I3T1Z4_LOTJA | 5.00E-32 | Uncharacterized protein {ECO:0000313|EMBL:AFK46536.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00009 | 168409 | 168681 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000009s00001402.1 | PF12609.3 | DUF3774 | 8 | 88 | 5.30E-26 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.449 |
| SRR1783600 | control | 0.419 |
| SRR1783602 | moderate drought stress | 0.139 |
| SRR1811619 | moderate drought stress | 0.209 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.066 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.700 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1135.220 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1126.191 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.848 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.225 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.514 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.664 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.595 |
| SRR2868004 | Drought Stress (root) | 0.000 |
| SRR2967015 | Control (root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.241 |
| SRR9715740 | Leaf | 2.344 |
| SRR9715741 | Leaf | 0.239 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.419 |
| SRR9715743 | Root | 0.593 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 93.169 |
| SRR8749028 | MeJA induced 9h | 367.612 |
| SRR8749029 | MeJA induced 9h | 195.928 |
| SRR8749030 | Uninduced | 105.820 |
| SRR8749031 | Uninduced | 159.051 |
| SRR8749032 | Uninduced | 235.133 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 28.793 |
| SRR8400027 | Control - Root | 17.442 |