Gene detail

Gene detail information of Glyur000009s00001399.1

Functional Annotation

Database	Orthologs	Annotation
TAIR	AT2G20900.3	diacylglycerol kinase 5
NR	AFK41745.1	unknown [Medicago truncatula]
Swissprot	tr\|Q9C5E5\|DGK5_ARATH	Diacylglycerol kinase 5
trEMBL	tr\|I3SNA3\|I3SNA3_MEDTR	Diacylglycerol kinase {ECO:0000256\|RuleBase:RU361128}

Sequence

Transcript Sequence

>Glyur000009s00001399.1
ATGATCTTGATCTGATTGTGGAGAGAATTATAATCCTCCACTCTAATATGGCAACGTGCCGCTCCATAGTTAAGGGTGAACAAAAAAAAAAAACGTGACGCTCCCTGTCCATTCCCATCCTCCTCTTTGATTGTGAATATCCCTCTCCACTTTTTGCTTTCTCTGAATCTCAATTCTGCTTCTGCGTAGTAGTCATCACCACTCCCTCAGATCTCCCCCGTCATTCTCATCTCCAGCGTTTTGCAGCTGAATGCGACACAATGGCTTCTCGCAGCTCCGACTCCAACTTCTTGAACAACTTTTGGATCCCGAACCACGTGCTCGTGCCGGAGTCCAAGGTNGAGGATGGCGAGATCGACGGTGATGGACCCAAGTGTCCGGTGCTTGTTTTTGTTAACTCCAAGAGTGGTGGTCAGCTAGGAGGGGANCTCTTGAAAACCTATCGTGCGCTTCTTAAAGAGAAACAGGTNTATGATTTGGGGGAAGAGGCTCCTGATAAGGTTCTGCGAAGAATCTATGCTAATTTGGAAAACCTCAAGCTTCAGGGTGATCAGCTTGCTATAAGGACTATGGAGAGGTTGAGATTAATTGTTGCAGGGGGTGATGGAACAGCTGGCTGGTTACTTGGAGTTGTTTGTGATCTCAAATTATCTCATTCGCCCCCAATTGCCACGGTTCCCTTGGGCACAGGGAATAATCTACCATTTGCATTTGGTTGGATTGTGGTTCCTACTATGCCTTTCAATCTGAAGTTGAAGTTTTCAGCAATAGCTTTGACTGGGAAGAAGAACCCGGGAACAGATGAACATTCAGTTGAGGCATTTCTAAATCAAGTAATGAAAGCTAAGGAAATGAAAATTGACAACTGGCACATTCTTATGCGGATGAGGGCCCCGAAACAAGGTTCATGTGATCCAATTGCACCTCTTGAGCTACCACATTCTTTGCATGCCTTCCATCGTGTATCTGAGGCAGATGAACTTAATATGGAAGGTTGCCATACTTTTCGTGGGGGATTTTGGAATTACTTCAGCATGGGAATGGATGCTCAAGTGTCTTATGCGTTTCATTCTGANCGAAAAATGCATCCTGAAAAGTTCAAGAATCAGTTGGTTAATCAGAGTACTTATGCTAAGCTTGGATGCACACAAGGATGGTTTTTTGCTCCTCTATTCCATCCTCCTTCCAGGAACATAGCACATATTGCAAAAGTAAAAGTCATGAAAACACATGGTCATTGGGAAGATCTGCACATACCTTCCAGCATCCGGTCAATTGTATGCCTTAACTTACCTAGCTTTTCTGGTGGATTGAATCCATGGGGTACACCAAACAGAAAGAAGCGGCGCGATAGAGATTTGACACCTCCATATGTAGATGATGGCCTTCTAGAGGTTGTTGGTTTCAGAGATGCCTGGCATGGGCTTGTTTTAATTGCTCCAAATGGACATGGAACTCGCCTTGCTCAGGCACGCAGAATCCGCTTTGAGTTTCACAAAGGTGCAGCAGATCATACATTCATGAGGATTGATGGGGAACCTTGGAAGCAACCCCTCCCAGTTGACGATGATACTGTTTTGGTGGAGATTTCTCGCCACGGCCAGGTTAACATGCTAGCCACTCATGATTCCAGGGCTAAAAGTGCAAATGATCCGTCATCACCATATCATAATGATGCCGAAGAAGTTGATAGTGATGATGAAGACTCTGTCGCAGATGAATTCCGGAAGTTTGGTGCAGCAGAAACATTTAAAATCCCAGATGATGTTGATATTGCTCATCTTAGTTAGGTCTTTCACTATTAAGCCATTCTTTACTGTCATGAGATTGACATTGCNTACCTATTTGCTAAGACCTTATATGTATTTATCGTAGCCTCCGTCAATTGTCACCTGTTTACTTAATTCTAGCTGCGTTATGTCTGCATTGCAAACATG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00009	150812	156260	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K00901	dgkA, DGK	EC:2.7.1.107	Glycerolipid metabolism	map00561
			Glycerolipid metabolism	map00561
			Glycerolipid metabolism	map00561
			Glycerophospholipid metabolism	map00564
			Glycerophospholipid metabolism	map00564
			Glycerophospholipid metabolism	map00564
			Phosphatidylinositol signaling system	map04070
			Phosphatidylinositol signaling system	map04070
			Phosphatidylinositol signaling system	map04070
			Phospholipase D signaling pathway	map04072
			Phospholipase D signaling pathway	map04072
			Phospholipase D signaling pathway	map04072
			Choline metabolism in cancer	map05231
			Choline metabolism in cancer	map05231
			Choline metabolism in cancer	map05231

Gene Ontology

biological_process
GO:0007205 protein kinase C-activating G-protein coupled receptor signaling pathway

molecular_function

GO:0004143 diacylglycerol kinase activity

GO:0016301 kinase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000009s00001399.1	PF00781.19	DAGK_cat	40	182	5.50E-21
Glyur000009s00001399.1	PF00609.14	DAGK_acc	253	427	1.20E-39

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	14.393
SRR1783600	control	14.547
SRR1783602	moderate drought stress	17.012
SRR1811619	moderate drought stress	16.805

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	22.137
DRR006520	Root Summer glycyrrhizin high producing strain	21.734
DRR006521	Root Winter glycyrrhizin high producing strain	6.933
DRR006522	Root Winter glycyrrhizin high producing strain	6.635
DRR006523	Root Summer glycyrrhizin low producing strain	15.928
DRR006524	Root Summer glycyrrhizin low producing strain	16.265
DRR006525	Leaf Summer glycyrrhizin high producing strain	11.143
DRR006526	Leaf Summer glycyrrhizin high producing strain	11.046

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	40.120
SRR2868004	Drought Stress (root)	32.753
SRR2967015	Control (root)	32.780

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	20.201
SRR9715740	Leaf	16.821
SRR9715741	Leaf	20.178
SRR9715739	Root	7.019
SRR9715742	Root	14.606
SRR9715743	Root	11.570

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	6.040
SRR8749028	MeJA induced 9h	10.802
SRR8749029	MeJA induced 9h	6.382
SRR8749030	Uninduced	6.948
SRR8749031	Uninduced	3.409
SRR8749032	Uninduced	1.962

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	33.260
SRR8400027	Control - Root	31.727