Gene detail

Gene detail information of Glyur000009s00001396

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G03940.1	3.00E-82	HXXXD-type acyl-transferase family protein
NR	XP_003540336.1	0	PREDICTED: malonyl-coenzyme A:anthocyanin 3-O-glucoside-6''-O-malonyltransferase-like [Glycine max]
Swissprot	tr\|Q9ZWB4\|3AT1_ARATH	3.00E-99	Coumaroyl-CoA:anthocyanidin 3-O-glucoside-6''-O-coumaroyltransferase 1
trEMBL	tr\|I1LUB9\|I1LUB9_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA12G32660.1}

Sequence

Transcript Sequence

>Glyur000009s00001396.1
ATGGCTCATCACACAGTGAAGATCTTAGAACGATGTGAAGTTGCTCCACCACCGGGTTCACTTCCCCCAACCACTCTTCCCCTAGGTTTCTTTGACNTTCCATGGCTTTTTTGCCAACCCGCAAAACGCATCTTCTTCTACGAGTTCCTCCATTCCAAAAACCACTTCCTCCAAACGGCACTTCCAATTCTGAAGCACTCACTTTCACTCACTCTCCAACACTTCTTCCCCTTTGCCTCCAATCTCATCCTCCCTCCACACCCTTACAACCACGTCCCTTACATCCGTTACCTTAACGGCGACTCTCTCCCCTTCACCGTAGCAGAATCCCCTNCAGATTTCAACCTCCTCGTATCCGATTCCCCACAAGACGCTCAAAACTGGCACCCCCTTGTTCCCTCTTTGCCCTCGCCTCGCACGGAGCACGATGGCACACTTGTGTTCCCTCTCATGGCCATTCAGGTCACGGTTCTCCCAAATTCTGGATTCAGCATCTGCCTCATGTTCAGCCACGTGGCGGTTGATGGCAGAGCATTTCATCACTTCATGAAGTTTTGGGCCTCTGTTTGCAAGGCGAAAGGGGAATCCCCTGTTTCTCTGTCTCTGCCTTTCCACGATAGGGAAAAAATGGAAGACCCAAAAGGGCTTAAGCTCATTTACTTGCAGGAACTGAGAAACTCGGCGTCGCAAAGCATGNAATTTGCGGGGATTGCTCCTAATGTTTGCACTGATAAGGTGCGCGCCACTCTTGTGTTGAGTTGTGAACGTGTTGAGAAACTGAAGAAATGGGTCNCTCTTGAATGCAAATGCAATGGTTATGCTTCAGGGGCACAACAACACGTGTCAACCTTTGTGGTAACATGCTCCTTGTTTTGGGTCTGTATGATAAAAGCAGAGCAGAAGCAGAGCAATNATAAAGGTGATTGTGTTGAAGATGAACTCTGCTACTTCATCTTTCTTGCAGATTGTCGTGATCATCCTGAATTTTCATTACCTTCAACATACTTTGGGAATTGNNTAGCCTCTCTTATTGTGGGTGTGAAGAGGGGTGAGCTAGTTGGAGAAAATGGGATGGTTGTGGCAGTAAACGCTATNGAAAGGAAGGTTAGAGATTTCAAGAGTGATGCTTTGGTAGGGGCTGAAACATTGATGTCCGATTATGGAGAATTGAGGAAACCGGGTCAATCTGTACTAGTAATTGCAGGGTCACCAAAACTGGCTGTGTANGAGACTGATTTTGGGTGGGGAAAGCCCAGAAAGTCTGAAGTGGTTCATCTTGATTCTGTGAGCGGAATTTCTCTCTCTGATTGTAGGGACGGNAAGGGTGGAATTGAAGTCGGAATGGCAGTTGAGAGAACTCGAATGGATAATTTCACCAACATCTTAGAAGACCATCTTGATATTATTATTAAGGTTGGTCCCAAAACAAAAACAGCTACATCTCTTCCTCTCACATTCCTTGACTTGCCATTGGCAGGTCCCATTTATGTTAAACGCCAATTCTTCTATCAGTTTCCTCATTCGACCCAACATTTTCGCGAAACAACACTCCCCACTCTCAAAAGCTCTCTCTCCCTTACTCTTCAACATTTCTACCCTCTAGCTGGAAATCTCCTCTGTCCCCCACCACCCCAAAACCCCTTCATTCAGTGCACCCATGATGACTCTGTCACCTTAACCGTCATTGAATCTGAATTAGATTTCCACCATCTCTCATCCAATGACCCCAAAAGTCGCAAAGACTTGGATCAACTGGTTCCCAAGTTAACATACACAACAATGGATGATGATGATGACACCTTGATCTTCCCTTTGGTGGCATTGCAGGCCTCAATTTTCCCCAACCATGGCCTTTGCATTGCCATCACATATTGTCATGTGATGGATGNTAGTTGTTGTAGTCATTTCATGAAGTCCTGGTCTTCCATTCATCGAACCGGTGGAAACATCGATCTCACCCTACCCTGCTTTGATAGAGAAGTTTTGAGGGACCCCACAGGACTCGAGGCTGTTTTCTTAAGAGACTATTTTGAAGAGAGGAAATCATGGAAGGACAAACTCATTGCAGTTCATACCCAAACTACTAATCAACGTGTCGGTGAAGATGAAGACTTTGTTAAGGCAACACTTGTTTTTGGGAAAGAAGAAATTGAGGGGCTGAAAAAATGGGTACTGAATCGGTGGAAGAAAAATGATGAATTTGAATCCAACAACGCGCCGCAATATCTCTCGAAATTTGTGGTGACGTGTGGTTTGGTTTGGGCTGGCTTGGTTAAGACCAGAAAAGATGATGCACAAGAAGATGATCAGATCAAAGAGGAGTATTTCCGCTTCGCAGGAGATTGCAGAGATCGACTTGGGTACACAATCCCAGAGGGGTATTTTGGAAACTGCTTAACGCTGTGTCATGCTACGCTCAAGAGAAAGGAGCTTAAGGGAGAAGATGGTTTTCTGAACACGGTGAAGGTCATTCATAGGGCTGTAACTGAGATGAAAAGTGAGCCCTTGAAGGATGCAGAAGATTGGAGGGCTTCATTTNCAAAGATGTATAAGTTTGGAAGTGTGTTGTTGGTAACAGGGTCGCCTAACTTCACTGTTTATGAGACTGATTTTGGATTTGGAAGACCAACAAAAGTTGAGATGGTACATTCTTTCAGGTGTATGTCTATTGCTGAAAGTGGAGACATGGAAGGAGGAGGAATTGAGGTTGGCTTGGTTGTTCCCAAAACAACAAGAGCTACCTCTCTTTCTCTAACATTCCTCGACCTGCCATTNGCAGGTCCCATTTATGTTAGACGCCAATTCTTCTATCAGTTTCCTCATTCAACACAACATTTTCTCAAAACAACACTCCCCACTCTCAAACACTCTCTCTCCCTTACCCTTCAGCATTTCTACCCTTTAGCTGGAAATCTCCTCTGTCCCCCACCACCCCAAAAGCCCTTCATTTGCTGCACCCATGACGACTCTGTCACCTTAACCGTTATCGAGTCTTCAGCAGATTTCAAGCATCTTTCATCCAATCACCCCAAAAGTCTCAAAGACTTGGATCACCTAGTTCCCAAGTTAACATACACAACAATGGATGAGGATGATGACACCTTGATATTCCCTTTGGTGGCTTTGCAGGCCTCAATTTTCCCCAACCAAGGCCTTTGCATTGCCATCACATATTGTCATGTGATGGATGATAGTTGTTGTAGTCATTTCATGAAGTCCTGGTCTTCCATTCATCGAACCGGTGGAAACATCGATCTCACCCTACCCTGCTTTGATAGAGAAGTTTTGAGGGACCCCGGGGAACTTGAGGCTATTTTCTTGAGAGACTATTTTGAAGAGAGGGAAAACTGGAAAAACAAACTCAGTACTGGACAAACTCAAACTAGTAAGTGTAGTGATGAAGACTTTGTTAAGGCGACGATTGTTTTTGGAAGAGAAGAAATTGAGGGGATGAAAAGATTGGTGCTGAATCAGTGGAAGAAAAATGATCGTCAATCCATTGCGCCTCAATATCTCTCAAAATTTGTGGTGGCGTGTGGTTTGGTTTGGGNTGGCTTGGTTAAAACAAGATGCANATCAAATGATGATGATGAACAAGAAGAAGATCACATCAAAGAGGAGTATTTCCGTTTTGCAGCAGATTGCAGAGATAGGCTTGAGTACCCAATACCAAAGGCATACTTTGGAAACTGCTTAACGCGGTGTCATGCAACGCTCAAGAGGAAGGACCTCATGGGAGAAGATGGTTTTGTGAATGCTGTGAGGGTCATTGAAGGGGAAGTGACTGAGATGAAAAATGAGCCCTTGAAAGGTGCAGAAGAGTGGAGGGCTTCGTTTATAAAGACGTTTGTGTTGGGAAGTGTTTTGTTGGCAACAGGGTCACCTAAGTTCACTGTTTATGAGACTGACTTTGGATTTGGAAGACCTACAAAGGTTGAGATGGTACATTCCTTCAAGGGTATGTCTCTTGCTGAAAGTGGAGACAAGGAAGGAGGAATTGAGGTTGGCTTGGTATTCAAAAGCGGGGAATTTGAGTATTTCAATTCTGTCATTGATCAAACACTTGAAGCTTTAAAATCCTAA

Protein Sequence

>Glyur000009s00001396.1
MAHHTVKILERCEVAPPPGSLPPTTLPLGFFDXPWLFCQPAKRIFFYEFLHSKNHFLQTALPILKHSLSLTLQHFFPFASNLILPPHPYNHVPYIRYLNGDSLPFTVAESPXDFNLLVSDSPQDAQNWHPLVPSLPSPRTEHDGTLVFPLMAIQVTVLPNSGFSICLMFSHVAVDGRAFHHFMKFWASVCKAKGESPVSLSLPFHDREKMEDPKGLKLIYLQELRNSASQSMXFAGIAPNVCTDKVRATLVLSCERVEKLKKWVXLECKCNGYASGAQQHVSTFVVTCSLFWVCMIKAEQKQSNXKGDCVEDELCYFIFLADCRDHPEFSLPSTYFGNXXASLIVGVKRGELVGENGMVVAVNAXERKVRDFKSDALVGAETLMSDYGELRKPGQSVLVIAGSPKLAVXETDFGWGKPRKSEVVHLDSVSGISLSDCRDGKGGIEVGMAVERTRMDNFTNILEDHLDIIIKVGPKTKTATSLPLTFLDLPLAGPIYVKRQFFYQFPHSTQHFRETTLPTLKSSLSLTLQHFYPLAGNLLCPPPPQNPFIQCTHDDSVTLTVIESELDFHHLSSNDPKSRKDLDQLVPKLTYTTMDDDDDTLIFPLVALQASIFPNHGLCIAITYCHVMDXSCCSHFMKSWSSIHRTGGNIDLTLPCFDREVLRDPTGLEAVFLRDYFEERKSWKDKLIAVHTQTTNQRVGEDEDFVKATLVFGKEEIEGLKKWVLNRWKKNDEFESNNAPQYLSKFVVTCGLVWAGLVKTRKDDAQEDDQIKEEYFRFAGDCRDRLGYTIPEGYFGNCLTLCHATLKRKELKGEDGFLNTVKVIHRAVTEMKSEPLKDAEDWRASFXKMYKFGSVLLVTGSPNFTVYETDFGFGRPTKVEMVHSFRCMSIAESGDMEGGGIEVGLVVPKTTRATSLSLTFLDLPXAGPIYVRRQFFYQFPHSTQHFLKTTLPTLKHSLSLTLQHFYPLAGNLLCPPPPQKPFICCTHDDSVTLTVIESSADFKHLSSNHPKSLKDLDHLVPKLTYTTMDEDDDTLIFPLVALQASIFPNQGLCIAITYCHVMDDSCCSHFMKSWSSIHRTGGNIDLTLPCFDREVLRDPGELEAIFLRDYFEERENWKNKLSTGQTQTSKCSDEDFVKATIVFGREEIEGMKRLVLNQWKKNDRQSIAPQYLSKFVVACGLVWXGLVKTRCXSNDDDEQEEDHIKEEYFRFAADCRDRLEYPIPKAYFGNCLTRCHATLKRKDLMGEDGFVNAVRVIEGEVTEMKNEPLKGAEEWRASFIKTFVLGSVLLATGSPKFTVYETDFGFGRPTKVEMVHSFKGMSLAESGDKEGGIEVGLVFKSGEFEYFNSVIDQTLEALKS

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00009	123660	148898	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function
GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000009s00001396.1	PF02458.10	Transferase	20	460	4.10E-35
Glyur000009s00001396.1	PF02458.10	Transferase	476	908	1.50E-43
Glyur000009s00001396.1	PF02458.10	Transferase	910	1349	4.70E-42
Glyur000009s00001396.2	PF02458.10	Transferase	13	86	0.00018
Glyur000009s00001396.2	PF02458.10	Transferase	148	449	1.90E-31
Glyur000009s00001396.2	PF02458.10	Transferase	455	895	2.10E-37

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	3.926
SRR1783600	control	3.843
SRR1783602	moderate drought stress	2.166
SRR1811619	moderate drought stress	2.108

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	1.236
DRR006520	Root Summer glycyrrhizin high producing strain	1.298
DRR006521	Root Winter glycyrrhizin high producing strain	0.376
DRR006522	Root Winter glycyrrhizin high producing strain	0.379
DRR006523	Root Summer glycyrrhizin low producing strain	1.566
DRR006524	Root Summer glycyrrhizin low producing strain	1.581
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.980
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.922

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	7.329
SRR2868004	Drought Stress (root)	7.389
SRR2967015	Control (root)	6.046

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	3.773
SRR9715740	Leaf	2.425
SRR9715741	Leaf	5.538
SRR9715739	Root	3.897
SRR9715742	Root	4.080
SRR9715743	Root	3.590

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	7.160
SRR8749028	MeJA induced 9h	16.130
SRR8749029	MeJA induced 9h	5.262
SRR8749030	Uninduced	44.414
SRR8749031	Uninduced	4.277
SRR8749032	Uninduced	2.074

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	6.941
SRR8400027	Control - Root	6.240