Gene detail

Database	Orthologs	E value	Annotation
TAIR	AT4G03280.1	3.00E-81	photosynthetic electron transfer C
NR	KHN04299.1	8.31E-134	Cytochrome b6-f complex iron-sulfur subunit, chloroplastic [Glycine soja]
COG	YP_007114877.1	1.00E-85	Cytochrome b6-f complex iron-sulfur subunit [Oscillatoria nigro-viridis PCC 7112]
Swissprot	tr\|P26291\|UCRIA_PEA	1.00E-118	Cytochrome b6-f complex iron-sulfur subunit, chloroplastic (Precursor)
trEMBL	tr\|I1LUB3\|I1LUB3_SOYBN	3.00E-134	Cytochrome b6-f complex iron-sulfur subunit {ECO:0000256\|RuleBase:RU004496}

Transcript Sequence

Protein Sequence

Scaffold	Start	End	Strand
Scaffold00009	94066	96778	+

Gene family	subfamily
--	--

KO	Enzyme	Enzyme ID	pathway	mapID
K02636	petC	EC:1.10.9.1	Photosynthesis	map00195

biological_process

GO:0015979 photosynthesis

GO:0055114 oxidation-reduction process

cellular_component

GO:0042651 thylakoid membrane

molecular_function

GO:0008121 ubiquinol-cytochrome-c reductase activity

GO:0009496 plastoquinol--plastocyanin reductase activity

GO:0016491 oxidoreductase activity

GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors

GO:0045158 electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity

GO:0051537 2 iron, 2 sulfur cluster binding

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000009s00001390.1	PF08802.5	CytB6-F_Fe-S	28	66	1.30E-20
Glyur000009s00001390.1	PF00355.21	Rieske	108	170	1.80E-16

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.223
DRR006520	Root Summer glycyrrhizin high producing strain	0.221
DRR006521	Root Winter glycyrrhizin high producing strain	0.459
DRR006522	Root Winter glycyrrhizin high producing strain	0.447
DRR006523	Root Summer glycyrrhizin low producing strain	0.506
DRR006524	Root Summer glycyrrhizin low producing strain	0.682
DRR006525	Leaf Summer glycyrrhizin high producing strain	986.229
DRR006526	Leaf Summer glycyrrhizin high producing strain	983.764

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	26.260
SRR8400027	Control - Root	20.339