Gene detail information of Glyur000009s00001389 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G03270.1 | 1.00E-63 | Cyclin D6;1 |
| NR | KHN36588.1 | 0 | Putative cyclin-D6-1 [Glycine soja] |
| Swissprot | tr|Q9ZR04|CCD61_ARATH | 2.00E-76 | Putative cyclin-D6-1 |
| trEMBL | tr|I1M3Y8|I1M3Y8_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G37890.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00009 | 82922 | 85377 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000009s00001389.1 | PF00134.18 | Cyclin_N | 24 | 151 | 9.10E-17 |
| Glyur000009s00001389.1 | PF02984.14 | Cyclin_C | 154 | 263 | 3.40E-08 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.077 |
| SRR1783600 | control | 2.229 |
| SRR1783602 | moderate drought stress | 1.254 |
| SRR1811619 | moderate drought stress | 1.211 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.322 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.403 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.260 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.384 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 9.389 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 9.713 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.437 |
| SRR2868004 | Drought Stress (root) | 4.201 |
| SRR2967015 | Control (root) | 4.006 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 6.095 |
| SRR9715740 | Leaf | 2.268 |
| SRR9715741 | Leaf | 1.684 |
| SRR9715739 | Root | 0.335 |
| SRR9715742 | Root | 0.949 |
| SRR9715743 | Root | 0.507 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.368 |
| SRR8400027 | Control - Root | 5.753 |