Gene detail information of Glyur000008s00001365 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G19340.1 | 2.00E-31 | |
| NR | XP_007143226.1 | 3.65E-109 | hypothetical protein PHAVU_007G054700g [Phaseolus vulgaris] |
| trEMBL | tr|V7BCD5|V7BCD5_PHAVU | 1.00E-109 | Uncharacterized protein {ECO:0000313|EMBL:ESW15220.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00008 | 714403 | 716705 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.086 |
| SRR1783600 | control | 0.087 |
| SRR1783602 | moderate drought stress | 0.149 |
| SRR1811619 | moderate drought stress | 0.123 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.576 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.418 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.261 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.256 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.293 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.219 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 16.705 |
| SRR2868004 | Drought Stress (root) | 6.045 |
| SRR2967015 | Control (root) | 8.332 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.245 |
| SRR9715740 | Leaf | 0.264 |
| SRR9715741 | Leaf | 0.670 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.156 |
| SRR9715743 | Root | 0.048 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.492 |
| SRR8749028 | MeJA induced 9h | 2.035 |
| SRR8749029 | MeJA induced 9h | 0.056 |
| SRR8749030 | Uninduced | 1.032 |
| SRR8749031 | Uninduced | 0.061 |
| SRR8749032 | Uninduced | 0.286 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.291 |
| SRR8400027 | Control - Root | 0.743 |