Gene detail information of Glyur000008s00001360 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G26230.1 | 1.00E-26 | |
| NR | XP_002314711.1 | 2.34E-82 | hypothetical protein POPTR_0010s10090g [Populus trichocarpa] |
| Swissprot | tr|Q3E936|MAKR1_ARATH | 1.00E-58 | Probable membrane-associated kinase regulator 1 |
| trEMBL | tr|B9HV78|B9HV78_POPTR | 9.00E-83 | Uncharacterized protein {ECO:0000313|EMBL:EEF00882.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00008 | 701660 | 702604 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.481 |
| SRR1783600 | control | 0.395 |
| SRR1783602 | moderate drought stress | 2.239 |
| SRR1811619 | moderate drought stress | 2.349 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.530 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.383 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 23.154 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 21.769 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.945 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.318 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.031 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.936 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.593 |
| SRR2868004 | Drought Stress (root) | 4.575 |
| SRR2967015 | Control (root) | 8.103 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.467 |
| SRR9715740 | Leaf | 1.512 |
| SRR9715741 | Leaf | 3.288 |
| SRR9715739 | Root | 1.367 |
| SRR9715742 | Root | 2.760 |
| SRR9715743 | Root | 2.882 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 36.919 |
| SRR8749028 | MeJA induced 9h | 34.171 |
| SRR8749029 | MeJA induced 9h | 12.317 |
| SRR8749030 | Uninduced | 7.608 |
| SRR8749031 | Uninduced | 1.275 |
| SRR8749032 | Uninduced | 8.468 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.926 |
| SRR8400027 | Control - Root | 1.102 |