Gene detail information of Glyur000008s00001356 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_007157153.1 | 3.46E-18 | hypothetical protein PHAVU_002G047100g [Phaseolus vulgaris] |
| Swissprot | tr|Q2RAC5|CCT13_ORYSJ | 7.00E-11 | Cyclin-T1-3 |
| trEMBL | tr|V7CG51|V7CG51_PHAVU | 1.00E-18 | Uncharacterized protein {ECO:0000313|EMBL:ESW29147.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00008 | 657545 | 659966 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 16.383 |
| SRR1783600 | control | 16.702 |
| SRR1783602 | moderate drought stress | 26.752 |
| SRR1811619 | moderate drought stress | 26.279 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 16.848 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 16.772 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 32.446 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 31.386 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 14.952 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 14.580 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 16.901 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 16.454 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 43.612 |
| SRR2868004 | Drought Stress (root) | 48.732 |
| SRR2967015 | Control (root) | 40.691 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 30.552 |
| SRR9715740 | Leaf | 30.968 |
| SRR9715741 | Leaf | 47.334 |
| SRR9715739 | Root | 2.944 |
| SRR9715742 | Root | 13.126 |
| SRR9715743 | Root | 12.402 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 19.448 |
| SRR8749028 | MeJA induced 9h | 41.794 |
| SRR8749029 | MeJA induced 9h | 30.190 |
| SRR8749030 | Uninduced | 110.928 |
| SRR8749031 | Uninduced | 147.123 |
| SRR8749032 | Uninduced | 116.354 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 42.900 |
| SRR8400027 | Control - Root | 35.497 |