Gene detail information of Glyur000008s00001354 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G26330.1 | 3.00E-49 | Cupredoxin superfamily protein |
| NR | XP_004496752.1 | 1.25E-99 | PREDICTED: mavicyanin-like [Cicer arietinum] |
| Swissprot | tr|P80728|MAVI_CUCPE | 3.00E-38 | Mavicyanin |
| trEMBL | tr|I1NGC5|I1NGC5_SOYBN | 3.00E-96 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA20G28210.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00008 | 640715 | 642879 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000008s00001354.1 | PF02298.12 | Cu_bind_like | 33 | 116 | 1.10E-29 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 30.164 |
| SRR1783600 | control | 30.730 |
| SRR1783602 | moderate drought stress | 42.773 |
| SRR1811619 | moderate drought stress | 42.763 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 12.763 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 11.494 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 11.046 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 10.624 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 18.325 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 17.423 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.533 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.501 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 15.858 |
| SRR2868004 | Drought Stress (root) | 14.038 |
| SRR2967015 | Control (root) | 15.802 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.658 |
| SRR9715740 | Leaf | 6.058 |
| SRR9715741 | Leaf | 6.268 |
| SRR9715739 | Root | 23.782 |
| SRR9715742 | Root | 21.604 |
| SRR9715743 | Root | 19.464 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 13.963 |
| SRR8749028 | MeJA induced 9h | 2.387 |
| SRR8749029 | MeJA induced 9h | 3.597 |
| SRR8749030 | Uninduced | 0.257 |
| SRR8749031 | Uninduced | 0.084 |
| SRR8749032 | Uninduced | 2.152 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 25.198 |
| SRR8400027 | Control - Root | 25.436 |