Gene detail information of Glyur000008s00001317 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G48630.2 | 3.00E-07 | Cyclin family protein |
| NR | AFK35148.1 | 2.87E-08 | unknown [Lotus japonicus] |
| Swissprot | tr|Q9FJK7|CCC12_ARATH | 2.00E-08 | Cyclin-C1-2 |
| trEMBL | tr|I3S4F6|I3S4F6_LOTJA | 1.00E-08 | Uncharacterized protein {ECO:0000313|EMBL:AFK35148.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00008 | 412072 | 413169 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.508 |
| SRR1783600 | control | 5.896 |
| SRR1783602 | moderate drought stress | 23.548 |
| SRR1811619 | moderate drought stress | 19.702 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.593 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.642 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.901 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.218 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.821 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.549 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.076 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.251 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.972 |
| SRR2868004 | Drought Stress (root) | 1.531 |
| SRR2967015 | Control (root) | 0.436 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.560 |
| SRR9715740 | Leaf | 0.191 |
| SRR9715741 | Leaf | 0.710 |
| SRR9715739 | Root | 0.104 |
| SRR9715742 | Root | 1.207 |
| SRR9715743 | Root | 0.725 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.884 |
| SRR8749028 | MeJA induced 9h | 3.669 |
| SRR8749029 | MeJA induced 9h | 1.407 |
| SRR8749030 | Uninduced | 5.344 |
| SRR8749031 | Uninduced | 2.993 |
| SRR8749032 | Uninduced | 1.670 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.885 |
| SRR8400027 | Control - Root | 0.964 |