Gene detail information of Glyur000008s00001316 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G14860.1 | 4.00E-12 | ovate family protein 11 |
| NR | KEH43870.1 | 2.29E-70 | ovate transcriptional repressor [Medicago truncatula] |
| Swissprot | tr|F4I8R6|OFP12_ARATH | 2.00E-20 | Transcription repressor OFP12 |
| trEMBL | tr|A0A072W0S4|A0A072W0S4_MEDTR | 9.00E-71 | Ovate transcriptional repressor {ECO:0000313|EMBL:KEH43870.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00008 | 401079 | 401708 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | OFP |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000008s00001316.1 | PF04844.8 | Ovate | 129 | 191 | 6.40E-22 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 25.483 |
| SRR1783600 | control | 25.603 |
| SRR1783602 | moderate drought stress | 18.258 |
| SRR1811619 | moderate drought stress | 18.671 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.035 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.910 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.842 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.925 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.733 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.716 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 55.753 |
| SRR2868004 | Drought Stress (root) | 53.816 |
| SRR2967015 | Control (root) | 40.565 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.513 |
| SRR9715740 | Leaf | 0.264 |
| SRR9715741 | Leaf | 0.624 |
| SRR9715739 | Root | 16.967 |
| SRR9715742 | Root | 10.927 |
| SRR9715743 | Root | 8.270 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.904 |
| SRR8749028 | MeJA induced 9h | 0.788 |
| SRR8749029 | MeJA induced 9h | 0.483 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.183 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 43.771 |
| SRR8400027 | Control - Root | 29.705 |