Gene detail information of Glyur000008s00001313 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G05410.1 | 2.00E-98 | Protein of unknown function (DUF1423) |
| NR | XP_004496717.1 | 0 | PREDICTED: uncharacterized protein LOC101515003 [Cicer arietinum] |
| Swissprot | tr|Q9S736|OBE1_ARATH | 3.00E-08 | Protein OBERON 1 |
| trEMBL | tr|A0A072VQ13|A0A072VQ13_MEDTR | 0 | CDPK adapter protein, putative {ECO:0000313|EMBL:KEH43867.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00008 | 384846 | 387579 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.078 |
| SRR1783600 | control | 1.892 |
| SRR1783602 | moderate drought stress | 0.717 |
| SRR1811619 | moderate drought stress | 0.825 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.569 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.516 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.491 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.689 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.424 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.280 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.711 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.608 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.040 |
| SRR2868004 | Drought Stress (root) | 1.625 |
| SRR2967015 | Control (root) | 2.386 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.463 |
| SRR9715740 | Leaf | 0.450 |
| SRR9715741 | Leaf | 0.750 |
| SRR9715739 | Root | 0.179 |
| SRR9715742 | Root | 0.419 |
| SRR9715743 | Root | 0.224 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.700 |
| SRR8749028 | MeJA induced 9h | 1.917 |
| SRR8749029 | MeJA induced 9h | 1.331 |
| SRR8749030 | Uninduced | 0.632 |
| SRR8749031 | Uninduced | 1.773 |
| SRR8749032 | Uninduced | 1.768 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.576 |
| SRR8400027 | Control - Root | 3.156 |