Gene detail information of Glyur000008s00001305 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G22550.1 | 2.00E-31 | Protein of unknown function (DUF581) |
| NR | XP_007143270.1 | 4.46E-125 | hypothetical protein PHAVU_007G058400g [Phaseolus vulgaris] |
| trEMBL | tr|V7BCH2|V7BCH2_PHAVU | 2.00E-125 | Uncharacterized protein {ECO:0000313|EMBL:ESW15265.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00008 | 342457 | 345997 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000008s00001305.1 | PF04570.9 | DUF581 | 259 | 303 | 2.50E-21 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 70.413 |
| SRR1783600 | control | 71.016 |
| SRR1783602 | moderate drought stress | 55.813 |
| SRR1811619 | moderate drought stress | 55.699 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 112.688 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 111.103 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.215 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.138 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 103.492 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 103.352 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.606 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.614 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 19.521 |
| SRR2868004 | Drought Stress (root) | 17.344 |
| SRR2967015 | Control (root) | 14.234 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.762 |
| SRR9715740 | Leaf | 2.956 |
| SRR9715741 | Leaf | 2.536 |
| SRR9715739 | Root | 30.921 |
| SRR9715742 | Root | 46.451 |
| SRR9715743 | Root | 43.698 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.415 |
| SRR8749028 | MeJA induced 9h | 0.848 |
| SRR8749029 | MeJA induced 9h | 0.115 |
| SRR8749030 | Uninduced | 0.262 |
| SRR8749031 | Uninduced | 0.035 |
| SRR8749032 | Uninduced | 0.159 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 51.868 |
| SRR8400027 | Control - Root | 61.048 |