Gene detail information of Glyur000008s00001300 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G05450.2 | 4.00E-27 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
| NR | XP_004496706.1 | 5.08E-107 | PREDICTED: flocculation protein FLO11-like [Cicer arietinum] |
| Swissprot | tr|O64864|YLS3_ARATH | 6.00E-08 | Protein YLS3 (Precursor) |
| trEMBL | tr|I1LE35|I1LE35_SOYBN | 9.00E-101 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G39190.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00008 | 328658 | 329688 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000008s00001300.1 | PF14368.1 | LTP_2 | 9 | 109 | 3.90E-19 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.757 |
| SRR1783600 | control | 0.672 |
| SRR1783602 | moderate drought stress | 1.315 |
| SRR1811619 | moderate drought stress | 1.363 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.157 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.096 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.165 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.136 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.135 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.477 |
| SRR2868004 | Drought Stress (root) | 2.557 |
| SRR2967015 | Control (root) | 4.182 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.715 |
| SRR9715740 | Leaf | 0.139 |
| SRR9715741 | Leaf | 0.825 |
| SRR9715739 | Root | 0.995 |
| SRR9715742 | Root | 0.250 |
| SRR9715743 | Root | 0.856 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.097 |
| SRR8749028 | MeJA induced 9h | 0.342 |
| SRR8749029 | MeJA induced 9h | 0.085 |
| SRR8749030 | Uninduced | 9.593 |
| SRR8749031 | Uninduced | 52.377 |
| SRR8749032 | Uninduced | 2.874 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 8.876 |
| SRR8400027 | Control - Root | 5.638 |