Gene detail

Gene detail information of Glyur000008s00001294

Functional Annotation

Database	Orthologs	Annotation
TAIR	AT2G32010.2	CVP2 like 1
NR	XP_003536524.1	PREDICTED: type I inositol 1,4,5-trisphosphate 5-phosphatase CVP2-like isoform X1 [Glycine max]
Swissprot	tr\|Q9LR47\|IP5P3_ARATH	Type I inositol 1,4,5-trisphosphate 5-phosphatase CVP2
trEMBL	tr\|I1LE29\|I1LE29_SOYBN	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA10G39130.1}

Sequence

Transcript Sequence

>Glyur000008s00001294.1
ATGAGAGATGAGAATTCCAAGAAAAGCAAGCTCTCATGGTCAAAGAAAATGGTCAGAAAGTTCTTCAATATCAAAAGCAAATGTGAGGATTCCCAAACAGATGCNGTTGCTTATGGAGGAAGTGAGGTAGAATACAGAAGCAGGAATAGCTTCTCTGAGAGAGAGCCATGCACAATCAAAAAGAGCAAAACAGAGAAGTTTAGCAGGAGCGCCAGTCAGGTCAGGCGAGGAAGAATGAATCTTGACCATCCTCGAATCATAGATGTGCAAAACTATAGCATTTTTGTAGCTACATGGAATGTAGCTGGAAGATCCCCACCAAGTAATTTGACTTTAGATGATTGGCTTCATTCCTCTCCACCGGCTGATATTTATGTTCTTGGATTTCAAGAGATAGTTCCCTTGAATGCTGGTAATATCTTAGGGGCAGAGGACAATGGCCCTGCCAAAAAATGGTTGGCTCTCATCCGAAAGACTTTAAACAATCTTCCTGGAACCAGTGGAAATAGTGGATGTTATACACCATCTCCCATTCCACAACCAGTTGTGGAGCTAAATGCAGATTTTGAGGGATCAGCTAGGCAGAAGAATTCATCTTTCTTCCATAGGCGATCATTCCAGACAACTTCTAGTGGTTGGGGAATGGACAATGACCTTTCAGTTGTGCAGCCACGACTCGATCGAAGATACAGTGTTTGTGATCGTGTGATTTCTGGTCACAGGCCTAGTGACTTTGATCCCAGTTATAGATGGGGTTATAGGCCTAGTGACTATTCCAGGGCAAGTGACTACTCAAGACCAAGTGACTTTTCAAGATGGGGTTCATCTGATGATGATAATGGCCTTGCGGATTCTCCAAGTACAGTCTTGTTTTCACCAATGTCTTGTGGTGGACCTGCCTCTAATGAAGATGGATATCGCATGCCAGGAAATTCAAGGTANTGTCTTGTTGCCAGTAAGCAAATGGTGGGAATATATCTTACTATATGGGTGAGAAGTGAAGTGAAAGATCATGTTCAAAACATGAAAATATCGTGTGTCGGCAGAGGATTGATGGGTTATCTCGGAAATAAGGGATCCATCTCAATTAGTATGTCTGTGCATGAAACAAGCTTTTGCTTTATCTGTAGCCATTTAACCTCAGGACAGAAAGAGGGTGATGAACTAAGAAGAAATTCTGATGTCATGGAGATTCTTAAAAAGACAAGGTTTCCCCGTGTTCATGGTGTGGACAATGAGAAATCTCCACAGACAATCCTTGAGCATGATCGAATCATATGGCTTGGAGATTTGAATTATCGGATTGCTCTCTCCTACCGTTCTGCTAAGGCACTTGTTGAGATGCAAAATTGGAGAGCATTGTTAGAAAATGATCAATTGAGGATAGAGCAGAAAAGAGGTCGCGCTTTTGTGGGATGGAATGAAGGGAAGATTTATTTTCCTCCAACATACAAGTATTCAACTAATTCTGATAGATACGCGGGAGATGATATGCACCCCAAGGAGAAAAGGAGAACACCTGCTTGGTGTGACCGTATTTTGTGGTATGGAGAAGGTCTCCATCAGTTATCTTATGTCCGCGGGGAATCGAGGTTTTCAGATCACAGACCTGTTTATGGCATATTTTGTGCTGAGGTTGAGTCAGCTCATGGCAGATTGAAGAAGAGTATGAGTTGTTCTCGTTCCAGAATTGAGGTGGAGGAACTTCTGCCATATCCTGGTGGATACACTGAACTAAGCTTTTTCTAAAGGAAGGAAGGCTGAGTATGAGACATGTCCATCCATATTCAACAATTGGTCCCCCATTACCAATAGGGAGTTACTTTGAAGGAATTTCATTCATGGAGGGAGATAGGGACAACCCATTTCCCACATACCGAAAAAGATTATATTATGTAGTTTTTGGTCTACACTCTACAGTCATGCTTTGCCTAACACANGATCAGTATTCAGTACAGTACATCATCATCATCTAGTTAACTGCTCAGTACTCACACACACCAGCTTCAGTCCTGTGCATAATTTGATACCCAATTAACAAAGACTCAACTTTCCACTGTCTCAGCCATTAGGTACTAAACTGTCAACTGTGGTTATTAATGCAAGTTGATGTTTATTTTAATTAAGCGCTTACTTATGATCAGAGTTTTTTCACTGTGCAGGAAGTTGAAGAAGGGGAATTTTTTTTATTCAAGATTTTTTAATTGTTTTAGGGGAATATTTATGATGAGTTGATGACTGAATGAAGGTGAAAGATCGNCAGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00008	282854	287256	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0046856 phosphatidylinositol dephosphorylation

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000008s00001294.1	PF03372.18	Exo_endo_phos	97	535	2.30E-30

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.509
SRR1783600	control	0.508
SRR1783602	moderate drought stress	0.645
SRR1811619	moderate drought stress	0.644

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	1.140
DRR006520	Root Summer glycyrrhizin high producing strain	1.127
DRR006521	Root Winter glycyrrhizin high producing strain	0.049
DRR006522	Root Winter glycyrrhizin high producing strain	0.048
DRR006523	Root Summer glycyrrhizin low producing strain	1.036
DRR006524	Root Summer glycyrrhizin low producing strain	1.034
DRR006525	Leaf Summer glycyrrhizin high producing strain	4.207
DRR006526	Leaf Summer glycyrrhizin high producing strain	4.044

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	2.945
SRR2868004	Drought Stress (root)	2.958
SRR2967015	Control (root)	2.986

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	4.225
SRR9715740	Leaf	7.224
SRR9715741	Leaf	5.578
SRR9715739	Root	0.087
SRR9715742	Root	0.402
SRR9715743	Root	0.475

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.842
SRR8749028	MeJA induced 9h	0.273
SRR8749029	MeJA induced 9h	0.172
SRR8749030	Uninduced	0.196
SRR8749031	Uninduced	0.117
SRR8749032	Uninduced	0.000

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	2.140
SRR8400027	Control - Root	2.595