Gene detail information of Glyur000008s00001288 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G22790.1 | 1.00E-124 | Kinase interacting (KIP1-like) family protein |
| NR | XP_003556062.1 | 0 | PREDICTED: golgin subfamily B member 1-like isoform X1 [Glycine max] |
| trEMBL | tr|I1NGI6|I1NGI6_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA20G28750.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00008 | 233494 | 236810 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000008s00001288.1 | PF07765.7 | KIP1 | 64 | 137 | 1.10E-40 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 10.892 |
| SRR1783600 | control | 11.199 |
| SRR1783602 | moderate drought stress | 16.156 |
| SRR1811619 | moderate drought stress | 15.568 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.021 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.608 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.108 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.099 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.804 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.769 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.766 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.898 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 15.514 |
| SRR2868004 | Drought Stress (root) | 10.895 |
| SRR2967015 | Control (root) | 12.134 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.286 |
| SRR9715740 | Leaf | 0.496 |
| SRR9715741 | Leaf | 0.506 |
| SRR9715739 | Root | 1.854 |
| SRR9715742 | Root | 5.012 |
| SRR9715743 | Root | 4.012 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.192 |
| SRR8749028 | MeJA induced 9h | 4.693 |
| SRR8749029 | MeJA induced 9h | 0.697 |
| SRR8749030 | Uninduced | 0.149 |
| SRR8749031 | Uninduced | 0.113 |
| SRR8749032 | Uninduced | 0.082 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 18.246 |
| SRR8400027 | Control - Root | 20.781 |