Gene detail information of Glyur000008s00001278 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G14740.2 | 6.00E-124 | Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region |
| NR | XP_003556066.1 | 0 | PREDICTED: uncharacterized protein LOC100814874 isoform X1 [Glycine max] |
| trEMBL | tr|I1NGJ4|I1NGJ4_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA20G28820.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00008 | 179255 | 183228 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000008s00001278.1 | PF05703.6 | Auxin_canalis | 22 | 307 | 3.40E-98 |
| Glyur000008s00001278.1 | PF08458.5 | PH_2 | 344 | 453 | 7.80E-48 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 10.295 |
| SRR1783600 | control | 10.022 |
| SRR1783602 | moderate drought stress | 12.061 |
| SRR1811619 | moderate drought stress | 11.885 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 15.467 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 15.364 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.968 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.446 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 17.063 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 16.590 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.959 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.876 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 16.908 |
| SRR2868004 | Drought Stress (root) | 8.978 |
| SRR2967015 | Control (root) | 19.968 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 11.151 |
| SRR9715740 | Leaf | 7.829 |
| SRR9715741 | Leaf | 9.670 |
| SRR9715739 | Root | 5.746 |
| SRR9715742 | Root | 10.549 |
| SRR9715743 | Root | 8.627 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 6.278 |
| SRR8749028 | MeJA induced 9h | 2.095 |
| SRR8749029 | MeJA induced 9h | 3.246 |
| SRR8749030 | Uninduced | 1.817 |
| SRR8749031 | Uninduced | 1.509 |
| SRR8749032 | Uninduced | 2.354 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 17.230 |
| SRR8400027 | Control - Root | 16.915 |