Gene detail information of Glyur000008s00001269 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G04200.1 | 0 | |
| NR | XP_004496672.1 | 0 | PREDICTED: dymeclin-like [Cicer arietinum] |
| trEMBL | tr|A0A072W0G2|A0A072W0G2_MEDTR | 0 | Dyggve-melchior-clausen syndrome protein {ECO:0000313|EMBL:KEH43790.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00008 | 108148 | 114345 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000008s00001269.1 | PF09742.4 | Dymeclin | 21 | 691 | 9.90E-160 |
| Glyur000008s00001269.2 | PF09742.4 | Dymeclin | 21 | 673 | 1.20E-165 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 14.481 |
| SRR1783600 | control | 14.461 |
| SRR1783602 | moderate drought stress | 10.591 |
| SRR1811619 | moderate drought stress | 10.595 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 12.111 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 11.890 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 15.778 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 15.572 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 15.770 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 16.293 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.902 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.940 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 14.460 |
| SRR2868004 | Drought Stress (root) | 13.614 |
| SRR2967015 | Control (root) | 12.924 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 7.848 |
| SRR9715740 | Leaf | 6.083 |
| SRR9715741 | Leaf | 7.030 |
| SRR9715739 | Root | 4.576 |
| SRR9715742 | Root | 10.702 |
| SRR9715743 | Root | 10.560 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 28.306 |
| SRR8749028 | MeJA induced 9h | 39.573 |
| SRR8749029 | MeJA induced 9h | 26.403 |
| SRR8749030 | Uninduced | 21.114 |
| SRR8749031 | Uninduced | 11.945 |
| SRR8749032 | Uninduced | 14.024 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 21.329 |
| SRR8400027 | Control - Root | 22.577 |