Gene detail information of Glyur000008s00001261 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G32980.1 | 7.00E-109 | |
| NR | XP_003556069.1 | 2.64E-168 | PREDICTED: uncharacterized protein LOC100816472 [Glycine max] |
| trEMBL | tr|I1NGL0|I1NGL0_SOYBN | 1.00E-168 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA20G28950.3} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00008 | 70678 | 73781 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000008s00001261.1 | PF15003.1 | HAUS2 | 7 | 228 | 3.40E-105 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 14.661 |
| SRR1783600 | control | 14.509 |
| SRR1783602 | moderate drought stress | 9.393 |
| SRR1811619 | moderate drought stress | 9.561 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 15.222 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 15.186 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.005 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.122 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 10.727 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 10.484 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.509 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.051 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 37.051 |
| SRR2868004 | Drought Stress (root) | 28.097 |
| SRR2967015 | Control (root) | 24.428 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 7.683 |
| SRR9715740 | Leaf | 3.368 |
| SRR9715741 | Leaf | 5.935 |
| SRR9715739 | Root | 5.099 |
| SRR9715742 | Root | 8.262 |
| SRR9715743 | Root | 7.251 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 21.229 |
| SRR8749028 | MeJA induced 9h | 14.561 |
| SRR8749029 | MeJA induced 9h | 13.338 |
| SRR8749030 | Uninduced | 8.159 |
| SRR8749031 | Uninduced | 6.382 |
| SRR8749032 | Uninduced | 6.498 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 25.581 |
| SRR8400027 | Control - Root | 28.316 |