Gene detail information of Glyur000007s00002882 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G52820.1 | 7.00E-174 | purple acid phosphatase 22 |
| NR | XP_003521454.2 | 0 | PREDICTED: purple acid phosphatase 22 [Glycine max] |
| COG | YP_004902613.1 | 4.00E-20 | putative phosphodiesterase [Kitasatospora setae KM-6054] |
| Swissprot | tr|Q8S340|PPA22_ARATH | 0 | Purple acid phosphatase 22 (Precursor) |
| trEMBL | tr|K7KG04|K7KG04_SOYBN | 0 | Purple acid phosphatase {ECO:0000256|RuleBase:RU361203} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00007 | 660311 | 670932 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000007s00002882.1 | PF00149.23 | Metallophos | 202 | 392 | 9.20E-20 |
| Glyur000007s00002882.1 | PF14008.1 | Metallophos_C | 407 | 472 | 4.00E-17 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.834 |
| SRR1783600 | control | 0.840 |
| SRR1783602 | moderate drought stress | 1.082 |
| SRR1811619 | moderate drought stress | 1.125 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.922 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.975 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 19.358 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 18.725 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.192 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.259 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.090 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.003 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.132 |
| SRR2868004 | Drought Stress (root) | 1.576 |
| SRR2967015 | Control (root) | 1.848 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.581 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.250 |
| SRR9715739 | Root | 0.273 |
| SRR9715742 | Root | 1.294 |
| SRR9715743 | Root | 0.998 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.522 |
| SRR8749028 | MeJA induced 9h | 1.939 |
| SRR8749029 | MeJA induced 9h | 1.897 |
| SRR8749030 | Uninduced | 2.030 |
| SRR8749031 | Uninduced | 2.637 |
| SRR8749032 | Uninduced | 2.738 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.937 |
| SRR8400027 | Control - Root | 7.906 |