Gene detail information of Glyur000007s00002869 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G52730.1 | 3.00E-18 | ubiquinol-cytochrome C reductase UQCRX/QCR9-like family protein |
| NR | XP_004494176.1 | 3.12E-26 | PREDICTED: cytochrome b-c1 complex subunit 9-like [Cicer arietinum] |
| Swissprot | tr|P46270|QCR9_SOLTU | 5.00E-23 | Cytochrome b-c1 complex subunit 9 |
| trEMBL | tr|A0A061ET87|A0A061ET87_THECC | 4.00E-26 | Ubiquinol-cytochrome C reductase UQCRX/QCR9-like family protein {ECO:0000313|EMBL:EOY08240.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00007 | 559681 | 560164 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000007s00002869.1 | PF05365.7 | UCR_UQCRX_QCR9 | 15 | 57 | 1.80E-18 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 121.226 |
| SRR1783600 | control | 121.628 |
| SRR1783602 | moderate drought stress | 91.374 |
| SRR1811619 | moderate drought stress | 91.894 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 132.877 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 129.528 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 75.330 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 69.779 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 79.643 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 80.938 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 97.414 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 96.442 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 381.159 |
| SRR2868004 | Drought Stress (root) | 263.698 |
| SRR2967015 | Control (root) | 233.845 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 160.551 |
| SRR9715740 | Leaf | 133.997 |
| SRR9715741 | Leaf | 146.657 |
| SRR9715739 | Root | 83.891 |
| SRR9715742 | Root | 101.355 |
| SRR9715743 | Root | 90.220 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 152.698 |
| SRR8749028 | MeJA induced 9h | 95.759 |
| SRR8749029 | MeJA induced 9h | 130.412 |
| SRR8749030 | Uninduced | 71.978 |
| SRR8749031 | Uninduced | 38.101 |
| SRR8749032 | Uninduced | 60.283 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 219.472 |
| SRR8400027 | Control - Root | 215.774 |