Gene detail information of Glyur000007s00002861 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G10120.1 | 5.00E-25 | |
| NR | KHN02220.1 | 1.72E-70 | hypothetical protein glysoja_002244 [Glycine soja] |
| Swissprot | tr|Q6NLC8|Y1648_ARATH | 3.00E-10 | Uncharacterized protein At1g66480 |
| trEMBL | tr|I1NAN8|I1NAN8_SOYBN | 6.00E-71 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G38020.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00007 | 532359 | 532895 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000007s00002861.1 | PF14009.1 | DUF4228 | 1 | 176 | 9.20E-31 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 11.769 |
| SRR1783600 | control | 11.992 |
| SRR1783602 | moderate drought stress | 10.679 |
| SRR1811619 | moderate drought stress | 10.320 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 35.530 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 36.576 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 141.336 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 142.410 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.997 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 9.557 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 52.493 |
| SRR2868004 | Drought Stress (root) | 87.898 |
| SRR2967015 | Control (root) | 112.371 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.981 |
| SRR9715740 | Leaf | 6.725 |
| SRR9715741 | Leaf | 8.496 |
| SRR9715739 | Root | 4.501 |
| SRR9715742 | Root | 13.770 |
| SRR9715743 | Root | 11.316 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.186 |
| SRR8749028 | MeJA induced 9h | 0.101 |
| SRR8749029 | MeJA induced 9h | 0.963 |
| SRR8749030 | Uninduced | 0.702 |
| SRR8749031 | Uninduced | 0.184 |
| SRR8749032 | Uninduced | 0.362 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 18.849 |
| SRR8400027 | Control - Root | 11.288 |