Gene detail

Gene detail information of Glyur000007s00002860

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G03870.1	1.00E-60	Glutaredoxin family protein
NR	XP_007162909.1	0	hypothetical protein PHAVU_001G190600g [Phaseolus vulgaris]
Swissprot	tr\|Q9FLE8\|Y5986_ARATH	2.00E-38	Uncharacterized protein At5g39865
trEMBL	tr\|V7CZS0\|V7CZS0_PHAVU	0	Uncharacterized protein {ECO:0000313\|EMBL:ESW34903.1}

Sequence

Transcript Sequence

>Glyur000007s00002860.1
ATGGGCTGCGTCTCCTCAAAACTTGTCAAGAAAGACCTCAAGCAAGAACAACAAGTCACTGTCATCAATGGCGGCGGTGGCGGTTACCTGAGCCACGTGGTTTCTCTCACTTCCTCAACCTACGGNGCACTCAGGTTGGACAACAACAACGACGACGACCAACCCGTCGACGACGACGTCGTTTTCGCAGAAGAAGCAGAACAACCCAAGTCATCGAAGCCATCCCCACCCCGCGAAGAGACAGAGGTTATCAATGCTTGGGAACTCATGGAGGGTCTCGAAGAAGGAGTACCCATTTCAAATCCCCCAAAGAAGAGCCCAAAGTCAACCCCTTTCCTTCGTGGGTTCGTTGCTTCTGACCCCAGAAGCCCCTTAAAGTTCCTCAACCAATTCGGGTCCCCCAAAACCACCCTGAAGAAGCCCCTTGGTAAGGAGAACAAGGTTCAAGTTAATGGGTTGGTAAGAGGGGGCATGAGACGCTTGGATTATAGTCCCAAGGGAATTTTCAAACCCATCAATTCTTCTCCTAATTCGGGTTTTCCAGTGAAAGGGTCTCCGGTTTGTGCTAGAAGGAACAGTTTTGGAAGTGAGAGAAAGAGTCCTAGTCCTCTGTTTGATCCAGAGCTTCTTGCTTCCTATGAGAAGGAACTTTCTGAAGAGGAAGAACAGATCAAGAGAATGGTTTGGGCCACGCCGAAAACACGAAGAGCCAGAAAATCAATGGACTCACTGTCCCTTCTTAACACGTTTGAGAACAAGTGTCCTCCTGAAGGGGAAAACTCTGTTATCATTTACACCACCACGTTGCGGGGAATCAGAAAGACTTTTGAGGATTGCAATAAGGTTCGGTCCATCATTGAGTCCTACTGTGTGCGCATGCGTGAGCGTGACGTGTCTATGGATTCAGGGTTTAAGGAGGAGTTGAGGAAGCTAATGGGGGAGAAACAAGTTCAGGTTCCTGTTGTGTTTGTGAAGGGAAGGTTGGTTGGGGGAGTTGATGAGGTTGTGAAGTTGGAAGAAGAAGGGAAATTGGGTGTTCTCTTGGATGGGATCCCCGGGGAATTGGGAGAGTGCAAAGGATGTGGGGGTGTGAGGTTTGTGATGTGTGTCGAGTGTAATGGAAGCTGTAAGGTTTTGGATGAGGAGCAAAAGAAAACGGTGAGGTGTGGTCAGTGTAATGAGAATGGAATAATTCAATGTCCTATCTGTCGTTAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00007	522486	523700	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0045454 cell redox homeostasis

molecular_function

GO:0009055 electron carrier activity

GO:0015035 protein disulfide oxidoreductase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000007s00002860.1	PF00462.19	Glutaredoxin	262	329	5.20E-13

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	2.528
SRR1783600	control	2.392
SRR1783602	moderate drought stress	3.193
SRR1811619	moderate drought stress	3.224

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	10.123
DRR006520	Root Summer glycyrrhizin high producing strain	9.896
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	4.950
DRR006524	Root Summer glycyrrhizin low producing strain	4.708
DRR006525	Leaf Summer glycyrrhizin high producing strain	4.169
DRR006526	Leaf Summer glycyrrhizin high producing strain	4.175

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	25.124
SRR2868004	Drought Stress (root)	12.814
SRR2967015	Control (root)	15.762

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	11.048
SRR9715740	Leaf	13.203
SRR9715741	Leaf	8.559
SRR9715739	Root	5.253
SRR9715742	Root	5.684
SRR9715743	Root	4.882

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	8.209
SRR8749028	MeJA induced 9h	3.352
SRR8749029	MeJA induced 9h	4.970
SRR8749030	Uninduced	1.350
SRR8749031	Uninduced	0.763
SRR8749032	Uninduced	0.592

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	15.103
SRR8400027	Control - Root	14.756