Gene detail information of Glyur000007s00002859 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G52710.1 | 7.00E-36 | |
| NR | KHN02217.1 | 2.20E-140 | hypothetical protein glysoja_002241 [Glycine soja] |
| trEMBL | tr|K7MZ91|K7MZ91_SOYBN | 1.00E-132 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G38060.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00007 | 514608 | 515477 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 36.140 |
| SRR1783600 | control | 36.429 |
| SRR1783602 | moderate drought stress | 47.995 |
| SRR1811619 | moderate drought stress | 47.518 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 130.440 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 127.421 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 64.976 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 62.919 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 162.495 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 162.281 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 31.813 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 33.597 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 51.952 |
| SRR2868004 | Drought Stress (root) | 95.929 |
| SRR2967015 | Control (root) | 129.134 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 222.083 |
| SRR9715740 | Leaf | 119.323 |
| SRR9715741 | Leaf | 274.839 |
| SRR9715739 | Root | 701.164 |
| SRR9715742 | Root | 316.714 |
| SRR9715743 | Root | 371.564 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 247.839 |
| SRR8749028 | MeJA induced 9h | 295.981 |
| SRR8749029 | MeJA induced 9h | 332.253 |
| SRR8749030 | Uninduced | 355.917 |
| SRR8749031 | Uninduced | 482.934 |
| SRR8749032 | Uninduced | 558.816 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 47.781 |
| SRR8400027 | Control - Root | 64.397 |