Gene detail

Gene detail information of Glyur000007s00002846

Functional Annotation

Database	Orthologs	Annotation
TAIR	AT2G36200.1	P-loop containing nucleoside triphosphate hydrolases superfamily protein
NR	XP_003554447.1	PREDICTED: 125 kDa kinesin-related protein-like [Glycine max]
Swissprot	tr\|O23826\|K125_TOBAC	125 kDa kinesin-related protein
trEMBL	tr\|I1NAP9\|I1NAP9_SOYBN	Kinesin-like protein {ECO:0000256\|RuleBase:RU000394}

Sequence

Transcript Sequence

>Glyur000007s00002846.1
CAAATCTCAAACGCACCACACCCATTTCCCACACTCACAGAGAGAAAGTGAGTTCAAGCAAATTGCAGAAGCGGATCTACCAATCTACCAATAACACACACACACACACACAAAATAGAAGGAATCGAAAATGTCTGGTCGCCACGAGAAAGAGAAGGGTGTTAACGTTCAGGTCCTCCTTCGCTGCAGGCCGTTCAGTGAGGAAGAGTTACGGAGCAATGCGCCGCANGTGGTGACTTGCCATGAATACAGTAGAGAAGTCGCGGTTTCTCAGAACATTGCTGGCAAGCACATCGACAGGGTTTTCACATTCGATAAGGTTTTTGGTCCTTCTGCACAACAAAAAGATCTTTATGAACAAGCTGTTACTCCAATAGTAAAGGAAGTGTTAGAGGGATTTAATTGTACAATATTTGCNTATGGTCAAACTGGTACTGGAAAAACCTACACAATGGAAGGGGAATGCAAAAGGTCCAAGAGTGGGCCCAATGGAGAGTTGCCTCCGGAAGCAGGAGTCATTCCTAGGGCTGTTAAGCAGGTNTTTGACACCCTTGAGAGCCAGAATGCTGAGTATAGTGTCAAAGTTACTTTTTTGGAATTGTATAATGAGGAGATCACTGATTTGCTTGCNCCAGAGGAGCTTTCGAAAGTTTCCCTGGAGGAGAAGCAAAAGAAGCAGCTGCCTCTCATGGAGGATGGCAAAGGTGGAGTTCTTGTAAGAGGGTTGGAGGAAGAAATTGTGACGAGTGCCAGTGAGATTTTTACTCTTTTGGAGAGAGGGTCTTCCAAAAGACGCACTGCTGAGACTTTACTGAACAAGCAGTCCAGTCGTTCACATTCACTATTTTCAATTACAATCCACATCAAGGAAGCAACCCCAGAAGGTGAAGAACTAATAAAATGTGGTAAACTGAATTTGGTTGATCTAGCTGGCTCAGAAAATATATCTCGTTCTGGTGCTAGGGAGGGTCGTGCAAGAGAAGCTGGAGAAATCAATAAAAGTTTGCTTACTTTAGGGCGGGTGATCAATGCACTTGTGGAGCACCTTGGTCATGTCCCTTACAGGGATAGCAAGCTGACGCGTTTACTGCGTGATTCACTTGGGGGAAGAACCAAGACGTGCATCATAGCGACAGTGTCCCCTGCTGTTCATTGCTTAGAGGAAACTTTNAGCACACTGGATTATGCACACAGGGCAAAGAACATTAAAAATAAGCCAGAGGTCAACCAAAAAATGATGAAATCAACACTTATCAAGGATCTTTATGGTGAAATCGATCGACTTAAGGCAGAGGTTTATGCTACCCGTGAGAAAAATGGAGTCTATATTCCAAAGGAAAGATACTACCAGGAAGAGAGTGANAAGAAGGCTATGGCAGATCAGATTGAGCAGATGGGCATCACAATAGAATCTTATCAGAAGCAACTTGAGGATATGCAAAACAAGTATGTTGACCAAGTTCGTCAATGCTCTGATTTGAGCAACAAACTTGATACTACTGAGAAAAACTTGAACAAGACTAGCAAGTTGCTTGCCAACACAGAGGAAGAATTAAAGAAATGTCGGTATACCCTGAAAGAAAAAGACTTCATCATTTCCGAACAGAGAAAAGCTGAAAATGCTCTGGCCCATCAAGCATGTGTTTTACGCGCTGATTTGGAGAAAGCTCTTCAGGATAATGCTTCATTATTTTCGAAAATTGGTAGAGAAGATGAACTGAACTCAGAAAACAGAGCTGTGGTGAACAATTTTCAAGCGGAGCTTGCCCAGCAGGTTGGTTCGCTTTGCAATACTGTTGCAACATCGTTGTCTGAACAGAATGAACATCTAAAAGGTGTGGAGAAACACTGTTTTTCTTTTTTGGGCATTCATGATAAGGCGGTTTATGATTTGAAAGAGAAAGTGAAATCCCTGAGGGCCGTGTACATATCTCATATAGAGGCAGTGCAAAATGTTGTGCGTTTGCATAAGGCGAACTCTGATGCTACCTTGATGGAGTTATCATCTGTTATATCCTCCAACGGTCATTCTATTGAAGAATTTCTTGCATCTGAGGCCACAGAAGCTGGTTCAATATTTGATGATCTTCAGAACACTCTTTCAACTCAGCATGGTGAAATGGCAGTTTTTGCAAGGGAGCTACGCCATAGATTCAATCTTAGTTTGGAACAAATAAAGGATATCTCTGAGCGATCTGAAGAAATTGTGGATAAGCTTTTCGAAGAATCAAAAAAGCTGGAAGAATTTGCATCACGGGCGGACCAAGTGCAAATGAAGAGCATTGATGAGTTTAAGAAAGCTTATGAGGAGCAGTCAAGATCTGATACGGAGAAACTGATTGCTGATATGACTAGTTTGGTTTCTGATCACATTCGTCGTCAAATGGATCTGGTAGACACAAAACTTGTTGATCTTAGAGAAAGTGGCATCAAGAACAAGTCATTCTTGGATGGACATGTGTCTTCAATGGGAGAAATTGTGACCCATGCAAAAAGGAAATGGCAGGCCTTTTGCATACAAGCAGAAAAAGATACGAAAGATACTGCTGATTATTCTGCAGCGAAGCATTGTCGTATGGAGGTACTCCTGCGGCAAAGTGTTGATACTGCTCATTCGGCTTCCCAACATGCAAAGAGGACACATGAGGGTGTAAATGAGATAGGGACCAAACATATTTCTGCAACAGAGTCACTTATCAGGAATGCTTCTGATAACATTGTGCAACATGTCGCGGAGGTCATTTCTGCTCAAGCGGAAGCGGAGCGAGATGTGGCAAAGAACAGCGATGATCTTCTCGAGCAGTTTGATGTCACGTCTGAAGAACAGCGCGAGCCCATCTGTAGCGTGGACTATGAGCCTAGTGGTACCACGCCAACAAAATACGAGNCTGATGTTCCGAGTAAGGGTACAATTGAGTCTCTTCGAACGTTGCCAATGGAAACCCTTCTTGAGGAATTCCGGGAAAACAATTCATATGAATCTTCTGATGTAAAGGAGTTGAAGCCATCACTTATTCCACGTTCTCCTCTTACCCAAATGAATTAATTGTGGTGGTAGCTTTCTTCGGTTGGGTCCGTTGTGGAATCATGTTTGTATCTCTATTTGTAACATCACATTGTTTTGTNATTACCATTAATTGTTCGAAGCATGCATCCTCTGGTGAAAGGCTATAAATATAATGTGATATCTAGGTCAAAGTACTCATCTAAATCCCNCCTTGGGATTAAATATATATCTC

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00007	439199	445850	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0007018 microtubule-based movement

cellular_component
GO:0005871 kinesin complex

molecular_function

GO:0003777 microtubule motor activity

GO:0005524 ATP binding

GO:0008017 microtubule binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000007s00002846.1	PF00225.18	Kinesin	18	359	4.90E-117

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	2.357
SRR1783600	control	2.325
SRR1783602	moderate drought stress	1.240
SRR1811619	moderate drought stress	1.216

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	2.295
DRR006520	Root Summer glycyrrhizin high producing strain	2.226
DRR006521	Root Winter glycyrrhizin high producing strain	0.033
DRR006522	Root Winter glycyrrhizin high producing strain	0.066
DRR006523	Root Summer glycyrrhizin low producing strain	0.752
DRR006524	Root Summer glycyrrhizin low producing strain	0.812
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.746
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.711

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	18.242
SRR2868004	Drought Stress (root)	8.084
SRR2967015	Control (root)	7.834

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	2.807
SRR9715740	Leaf	0.167
SRR9715741	Leaf	0.571
SRR9715739	Root	0.413
SRR9715742	Root	1.122
SRR9715743	Root	0.955

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	16.528
SRR8749028	MeJA induced 9h	16.128
SRR8749029	MeJA induced 9h	11.120
SRR8749030	Uninduced	2.182
SRR8749031	Uninduced	0.941
SRR8749032	Uninduced	1.068

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	10.257
SRR8400027	Control - Root	7.041