Gene detail information of Glyur000007s00002842 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G15040.1 | 5.00E-18 | Protein of unknown function, DUF584 |
| NR | XP_007162924.1 | 1.04E-91 | hypothetical protein PHAVU_001G191900g [Phaseolus vulgaris] |
| trEMBL | tr|V7CZT2|V7CZT2_PHAVU | 4.00E-92 | Uncharacterized protein {ECO:0000313|EMBL:ESW34918.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00007 | 417633 | 418304 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000007s00002842.1 | PF04520.8 | Senescence_reg | 37 | 223 | 7.00E-40 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 47.551 |
| SRR1783600 | control | 40.281 |
| SRR1783602 | moderate drought stress | 38.847 |
| SRR1811619 | moderate drought stress | 38.896 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 53.668 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 54.039 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 10.865 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 9.734 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 67.727 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 66.281 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 9.304 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 9.156 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 19.045 |
| SRR2868004 | Drought Stress (root) | 14.463 |
| SRR2967015 | Control (root) | 16.859 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 10.273 |
| SRR9715740 | Leaf | 12.829 |
| SRR9715741 | Leaf | 9.796 |
| SRR9715739 | Root | 75.523 |
| SRR9715742 | Root | 38.903 |
| SRR9715743 | Root | 46.066 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 20.285 |
| SRR8749028 | MeJA induced 9h | 15.471 |
| SRR8749029 | MeJA induced 9h | 7.039 |
| SRR8749030 | Uninduced | 0.506 |
| SRR8749031 | Uninduced | 0.008 |
| SRR8749032 | Uninduced | 1.169 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 10.261 |
| SRR8400027 | Control - Root | 10.193 |