Gene detail

Gene detail information of Glyur000007s00002816.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G24280.1	2.00E-65	alpha/beta-Hydrolases superfamily protein
NR	XP_004494225.1	1.97E-145	PREDICTED: lysosomal Pro-X carboxypeptidase-like [Cicer arietinum]
trEMBL	tr\|K7MZA3\|K7MZA3_SOYBN	2.00E-142	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA19G38351.1}

Sequence

Transcript Sequence

>Glyur000007s00002816.1
ATGTTCTTGTTTTTCTGCAGGAATTCTAGTGCAGGTGCTCTGAAAGGATGGTTCCGAACGGCTTTGATTTATGCGGCCATGACAGATTACCCAACACCTTCCAATTTCTTAACTCCCTTGCCAGCTTATCCGGTGAAAAAGATNTGCGAGGCAATTGATGACTCATCCACTGAAAATGAAACGTTCACCAAGTTGTNTGCCGCAGCTAATATCTTCTACAACTATAGTGGGAGTCTCACATGTTTTGATTTGGGGAGTGATGATTCCGATCCCGTTAATCACGCCGGATGGGATTGGCAGTCATGTACGGAAATGATAATGCCACTAGGTGGGAACAATGAGGAAAACATATTTCCGGCTCACGAGTGGGAATTGGGAGACATAGTCTCTGCCTGCAAACATGCCTATCACATAGAGCCAAGACCCCATTGGATTACCACTGAGTTTGGTGGCCATGATATTGGGAGAGTTTTGAAAAGGTCTAGTAGCAACATTATCTTCTTCAATGGTTTAAGAGACCCTTGGAGTGGGGCTCATCATGTAGACCTGAGGTTCTCAACTAAGGAAGATCCAGAGTGGCTAAAGGGTGTGAGGAAACAAGAAAGCGAGAGTGAGCATTGTTACAAAGTGATAAAAGGGGCTTGGAAGCTGATAGGAGACACGGCCAAAAAACACGGAGGAATGAAACTACTACGGAAATCATTCAGAATATGCAATAATAATAGTGATATAGGAGCAGAGGCTTTGGAAGGTTGGTTTCAATCGGCGTTGATTTATACGGCCATGACAGATTATCCCACACCGTCCAATTTCATGAATCCCTTGCCAGCATATCCAGTGAGAAAGATGTGCGAGGCGATTGACAGCCCAGTCACGGGAAATAATACATTAGCCAAGTTGTATGCAGCAGCGAAAGTCTACTACAACACCAGTGGTACCGCCACGTGTTTCAATTTGGACGGCAATTCAGATCCTCATGGTCTTGCAGGATGGCAGTGGCAGGCCTGTACGGAGATGGTAATGCCCCAAGGTGCAAACAATAAGGATAGCATATTCCCGGAATCTGAGTGGTCTTACAAAGACAGATCCTCTTACTGCGAATTTACCTACAACGTAGTGCCCAGACCCCACTGGATTACAACTGAGTTTGGCGCCCGTGATATCAAGAGAGTACTGAAAAGGTCTGCAAGCAACATTATCTTCTTTAATGGTTTAAGAGACCCTTGGAGTGGTGGAGGGGTGTTGAAGAACATATCAAAAACATTAGTTGCTATAGTTGCAAAAGAAGGGGCTCATCATGTGGACCTAAGGTACTCAACTAAGGAAGATCCAANGTGGCTTAAGGATATAAGGAAACAAGAGTTTTCACACCTCAACAGCGCCAGATAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00007	287723	302932	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K01285	PRCP	EC:3.4.16.2	Renin-angiotensin system	map04614
			Protein digestion and absorption	map04974

Gene Ontology

biological_process
GO:0006508 proteolysis

molecular_function
GO:0008236 serine-type peptidase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000007s00002816.1	PF05577.7	Peptidase_S28	17	178	1.50E-12
Glyur000007s00002816.1	PF05577.7	Peptidase_S28	202	452	2.00E-27

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.540
SRR1783600	control	0.590
SRR1783602	moderate drought stress	0.504
SRR1811619	moderate drought stress	0.599

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.154
DRR006520	Root Summer glycyrrhizin high producing strain	0.077
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.000
DRR006524	Root Summer glycyrrhizin low producing strain	0.055
DRR006525	Leaf Summer glycyrrhizin high producing strain	64.517
DRR006526	Leaf Summer glycyrrhizin high producing strain	65.535

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	11.860
SRR2868004	Drought Stress (root)	5.248
SRR2967015	Control (root)	6.873

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	17.327
SRR9715740	Leaf	11.857
SRR9715741	Leaf	10.509
SRR9715739	Root	0.071
SRR9715742	Root	0.267
SRR9715743	Root	0.382

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.326
SRR8749028	MeJA induced 9h	0.093
SRR8749029	MeJA induced 9h	0.890
SRR8749030	Uninduced	0.031
SRR8749031	Uninduced	0.037
SRR8749032	Uninduced	0.123

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	4.042
SRR8400027	Control - Root	6.012