Gene detail information of Glyur000007s00002798 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G11620.2 | 8.00E-97 | alpha/beta-Hydrolases superfamily protein |
| NR | KHN33167.1 | 0 | UPF0554 protein [Glycine soja] |
| trEMBL | tr|C6T7M0|C6T7M0_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA03G35830.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00007 | 189913 | 194326 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000007s00002798.1 | PF10230.4 | DUF2305 | 92 | 293 | 6.30E-44 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.586 |
| SRR1783600 | control | 2.762 |
| SRR1783602 | moderate drought stress | 2.874 |
| SRR1811619 | moderate drought stress | 3.038 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.070 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.010 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.125 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.076 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.327 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 9.577 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 9.561 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 17.543 |
| SRR2868004 | Drought Stress (root) | 14.308 |
| SRR2967015 | Control (root) | 19.292 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 6.587 |
| SRR9715740 | Leaf | 13.055 |
| SRR9715741 | Leaf | 11.967 |
| SRR9715739 | Root | 1.002 |
| SRR9715742 | Root | 0.367 |
| SRR9715743 | Root | 0.543 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 11.019 |
| SRR8749028 | MeJA induced 9h | 16.125 |
| SRR8749029 | MeJA induced 9h | 10.048 |
| SRR8749030 | Uninduced | 13.529 |
| SRR8749031 | Uninduced | 8.366 |
| SRR8749032 | Uninduced | 9.206 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 10.047 |
| SRR8400027 | Control - Root | 9.074 |