Gene detail information of Glyur000007s00002797 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G36020.1 | 1.00E-51 | HVA22-like protein J |
| NR | XP_004494238.1 | 8.81E-116 | PREDICTED: HVA22-like protein j-like isoform X2 [Cicer arietinum] |
| Swissprot | tr|Q8GXE9|HA22J_ARATH | 7.00E-69 | HVA22-like protein j |
| trEMBL | tr|A0A072U3A5|A0A072U3A5_MEDTR | 2.00E-106 | TB2/DP1, HVA22 family protein {ECO:0000313|EMBL:KEH24207.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00007 | 183288 | 186025 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000007s00002797.1 | PF03134.14 | TB2_DP1_HVA22 | 5 | 98 | 3.30E-30 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.138 |
| SRR1783600 | control | 5.449 |
| SRR1783602 | moderate drought stress | 6.352 |
| SRR1811619 | moderate drought stress | 6.138 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.955 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.950 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.779 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 9.091 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.783 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.570 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.516 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 27.620 |
| SRR2868004 | Drought Stress (root) | 59.675 |
| SRR2967015 | Control (root) | 67.316 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 14.926 |
| SRR9715740 | Leaf | 9.150 |
| SRR9715741 | Leaf | 19.558 |
| SRR9715739 | Root | 4.068 |
| SRR9715742 | Root | 6.503 |
| SRR9715743 | Root | 3.341 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.856 |
| SRR8749028 | MeJA induced 9h | 22.297 |
| SRR8749029 | MeJA induced 9h | 27.245 |
| SRR8749030 | Uninduced | 31.769 |
| SRR8749031 | Uninduced | 53.208 |
| SRR8749032 | Uninduced | 35.207 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 14.851 |
| SRR8400027 | Control - Root | 17.624 |