Gene detail information of Glyur000007s00002794 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G33180.1 | 1.00E-38 | |
| NR | AFK33549.1 | 5.83E-74 | unknown [Lotus japonicus] |
| trEMBL | tr|I3RZV7|I3RZV7_LOTJA | 2.00E-74 | Uncharacterized protein {ECO:0000313|EMBL:AFK33549.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00007 | 173188 | 175631 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.605 |
| SRR1783600 | control | 7.054 |
| SRR1783602 | moderate drought stress | 8.228 |
| SRR1811619 | moderate drought stress | 8.085 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 14.962 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 14.507 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.436 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 7.013 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 8.573 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 9.348 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 22.846 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 23.285 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 14.345 |
| SRR2868004 | Drought Stress (root) | 12.814 |
| SRR2967015 | Control (root) | 20.539 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 32.844 |
| SRR9715740 | Leaf | 41.540 |
| SRR9715741 | Leaf | 38.907 |
| SRR9715739 | Root | 7.489 |
| SRR9715742 | Root | 11.393 |
| SRR9715743 | Root | 10.921 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.964 |
| SRR8749028 | MeJA induced 9h | 6.282 |
| SRR8749029 | MeJA induced 9h | 4.887 |
| SRR8749030 | Uninduced | 3.182 |
| SRR8749031 | Uninduced | 1.209 |
| SRR8749032 | Uninduced | 2.173 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 20.592 |
| SRR8400027 | Control - Root | 19.614 |