Gene detail information of Glyur000007s00002785 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G52460.1 | 1.00E-17 | hydroxyproline-rich glycoprotein family protein |
| NR | XP_004494246.1 | 1.48E-105 | PREDICTED: uncharacterized protein LOC101501676 [Cicer arietinum] |
| trEMBL | tr|A0A072U4E7|A0A072U4E7_MEDTR | 2.00E-105 | Transmembrane protein, putative {ECO:0000313|EMBL:KEH24231.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00007 | 127192 | 128118 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.041 |
| SRR1811619 | moderate drought stress | 0.041 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.101 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.324 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.239 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.100 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.100 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.876 |
| SRR2868004 | Drought Stress (root) | 1.104 |
| SRR2967015 | Control (root) | 1.251 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.317 |
| SRR9715740 | Leaf | 1.101 |
| SRR9715741 | Leaf | 1.763 |
| SRR9715739 | Root | 0.127 |
| SRR9715742 | Root | 0.326 |
| SRR9715743 | Root | 0.199 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.362 |
| SRR8749028 | MeJA induced 9h | 2.347 |
| SRR8749029 | MeJA induced 9h | 3.076 |
| SRR8749030 | Uninduced | 3.565 |
| SRR8749031 | Uninduced | 7.700 |
| SRR8749032 | Uninduced | 12.403 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.036 |
| SRR8400027 | Control - Root | 0.138 |