Gene detail information of Glyur000007s00002781 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_003520714.1 | 1.78E-82 | PREDICTED: uncharacterized protein LOC100807520 [Glycine max] |
| trEMBL | tr|I1JQ82|I1JQ82_SOYBN | 7.00E-83 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA03G36010.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00007 | 109667 | 110326 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.107 |
| SRR1783600 | control | 3.175 |
| SRR1783602 | moderate drought stress | 4.017 |
| SRR1811619 | moderate drought stress | 4.011 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.557 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.629 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.983 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.417 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.648 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.466 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.586 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.859 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.927 |
| SRR2868004 | Drought Stress (root) | 5.807 |
| SRR2967015 | Control (root) | 3.260 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.386 |
| SRR9715740 | Leaf | 3.355 |
| SRR9715741 | Leaf | 3.767 |
| SRR9715739 | Root | 9.830 |
| SRR9715742 | Root | 9.019 |
| SRR9715743 | Root | 9.177 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 15.180 |
| SRR8749028 | MeJA induced 9h | 32.901 |
| SRR8749029 | MeJA induced 9h | 32.091 |
| SRR8749030 | Uninduced | 2.994 |
| SRR8749031 | Uninduced | 7.792 |
| SRR8749032 | Uninduced | 19.317 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.585 |
| SRR8400027 | Control - Root | 5.598 |