Gene detail

Gene detail information of Glyur000007s00002771.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G35940.3	9.00E-120	BEL1-like homeodomain 1
NR	XP_007162972.1	0	hypothetical protein PHAVU_001G195800g [Phaseolus vulgaris]
Swissprot	tr\|Q9SJ56\|BLH1_ARATH	2.00E-173	BEL1-like homeodomain protein 1
trEMBL	tr\|V7D1A0\|V7D1A0_PHAVU	0	Uncharacterized protein {ECO:0000313\|EMBL:ESW34966.1}

Sequence

Transcript Sequence

>Glyur000007s00002771.1
TCTCAGCAAGAGAAATCGTTCTTCTCTCTCTCTCTTTTTCCCTCAAAAGTTCTTAATTTGTTGCTCATCAAAGGGTTGCTTGNTTGGCTTGCATCAAATGATTTGAAAAGAAGAGGGTCAAATCAAAACAAGTTCTCCTAGCTAGTGTGTTGATCTATTCACAGTTGGGGTGGAATTGCAGAGGATTTGAGTCTGACANAGAGGTTTTCCTCTTTGTAAGTGAAGGGACTGATGAAATCCCAAAGATGGATAGATCACATATGCATGTCCACAGTTCTGAGNCGATCATGAAGCACGTGCGCCCTCCAATTCCCATCACACAACATTCATCATTACTTCTCCCACTTCATCACAGTTTATTTCCTCTGGATTCTTCTTCTGAGAAGACTATATCTCCACTTGGAGAGAGAGAAAGTAATTAATTTAATCAGCGTCAATTATTGGGAGGAGTTGTTTAATTTGATGGGTTGATCCACCAAGGCACAAATTAATATACCCAACACAGATTCACCACAAGGCTGAATTCAGTGAACTAAAACAACAACAACAACAACAACAACAACAACAACCTAATTATAATTTACTCAAAACAACGATCGATGGCGACGTACTTTCATGGTAACTCCGAAATCCAATCAGGTGGCGGCGCCGATGGATCACTCCAAACTCTTGTTCTCATGAATCCAGGCTACATCCACTACTCAGACACCCCTCAACAACAACAACAACCACCCTCTCACGGCGGCGCCACCGGCAACTTTGTATTCCTCAACGCAGCCGCCGCGGTCAACGGCAACAATAACTCCTTCAACCCCCACGCGCCGCCAACTTCACACACCCAACAATTGGTTGGCATCCCTCTCGGCGCCGCTACCTCACAAGACCTCAACCACCACCACCACCAGCACTCCATGCACGCGCACCACGACGTCCCTTCCCTGCATGGCTTCCTCCCCCGCATGCAGTACAACAACAACCCCTGGAACACAATTGACCAGAACACGGCGGCGCGTGACACCCCACGCGCCCAGCAGGGGCTGTCCCTCAGCCTGTCCTCCCAGCAGGCGCGGTTCGGTCAGGGCCAGGGCCAGGGCCAGGGCCAGGCGCCTGCTATGTCCGGTGGGTCGCCGTCGTCGGCTTCTGGGATCACTGCCAGTGCTGCCACCAATAACAATTTCGGCGGTTCGGGTGGGATTCAGAGTGTTCTCCTGAGCTCAAAGTATTTGAAGGCGGCGCATGAGCTTCTAGAAGAGGTGGTGAGTGTTAACACTGAATTATTGGCAAAGAAGGGTGGTGGTGGACAGAACAAGGTGATTAATGGAGTTGGAGAGTCATCCGCAGCAGCTGCAGGTAGTGGTGGAGATGGCTCAATTGGTGGTGGTGGTGGGGAAGGAAACGGGAAGCGTAGCTCTGACCTTTCAACAGCAGAAAGACAAGAAATCCAGATGAAGAAGGCAAAGCTAATCAGTATGCTTGATGAGGTGGAGCAAAGGTACAGACAGTATCACCACCAGATGGAGATCGTGGTCTCGTCGTTCGAACAAGCTGCAGGGATTGGGTCGGCGAGAACTTACACTGCCCTTGCACTGCAAACAATCTCCAAGCAGTTTCGGTGTTTGAAAGATGCCATAGCAGGCCAAATTCGTGCTGCCAATAAAAGCTTGGGAGAAGAGGATTGCTTTGGAGGTGGAAAAATTGAAGGTTCAAGGCTCAAATATGTAGACAATCACCTACGGCAACAGCGTGCTCTCCAACAATTGGGAATGATCCAGCACAATGCTTGGAGACCCCAGAGAGGATTGCCTGAAAGATCAGTTTCTGTTCTTCGTGCTTGGCTCTTCGAACACTTCCTCCACCCTTATCCCAAGGATTCAGACAAGCACATGCTTGCAAAACAAACAGGACTTACTAGGAGCCAGGTTTCAAATTGGTTTATCAATGCTCGGGTTCGGCTTTGGAAGCCAATGGTGGAAGAAATGTACATGGAGGAGATGAAGGAGAATGAACAAAATGGGTCTGAGGATAAATCAAGCAAGAGCAATGAAGATTCGTCTGTGAAAATGTCAGCCACTCAAGAGAAAGGTCCTACCTCTGAGACCAAACCTAAAGGTTTCCATTCCCCACAAGAAAACGTTTCTAAAAGCCAGAACACTCCAATAGTTTCAGTTTCTAGACCCCCACCACCAACATCACCACTTGGGGGAAATGTCAGAAACCAATCAGGATTCAGCTTCATTGGGTCATCAGAACTAGAAGGGATAGCACAGGGAAGTCCCAAGAAACCAAGGAACCATGAAATTATGCATTCCCCAAATAGTGTCCCTTCTATTAACATGGATGTTAAGCCCAATGAGGCAAACAACGAACAACTTTCAATGAAGTTTGGGGATGAGAGGCAGAGTAGAGATGGCTACTCTTTCATGGGAAACCAAACAAACTTCATGGGGGGATTTGGACAGTACCCAATTGGGGATATTGGTAGGTTTGATGCAGAACAGTTCACACCAAGGTTTTCAAGTAATGGGGTGTCACTCACTCTTGGTCTTGACTCAATACCAGGAACCCATCAAACATTTCTCCCAAACCAGAACATTCAACTGGGAAGAAGCTTGGACATAGGTGAACCAAATGAGTTTGGTGCGATAAACACTTCCTCTCCTCACTCTACAGCTGCTTATGAGAGTATCAGCATGCAAAACCCAAAGAGGTTTGCTGCACAATTGTTGCCAGACTTTGTGGCCTAAAATAAAGACATCGAAGGGTGAGCTTTGTGGTATAGCACACTTGCTAGTGCTCACCATTTCTGGGGTCAGCTCACAATTTCTTCTGCTCCCCTACTTATGTTGGGGACTATTGAAAAATTGTAGTGTAAAGAAAGAAGGAATTTTACTTTAGTATAGGTTTATACCCTACATAGAACCATTTGAGTTCTTAGATAGCTTAGGATTTGAGAGTATATGGTTGAGGTTGTATATTATTTTTGTAAGTTCTTAAGGTGGGATGGGATAGATGGATTGATGTCATAAATTTTAATTGGGTAAAGATACCAATATATCTTCGATTGAGAATATATGTTGTGATATTCTGAAAATCCTCCGTTCAAGAAACCAGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00007	20120	25813	-

Gene family

Gene family	subfamily
Transcription Factors Family	HB
EAR motif-containing Proteins	HB

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006355 regulation of transcription, DNA-templated

molecular_function
GO:0003677 DNA binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000007s00002771.1	PF07526.6	POX	202	345	4.50E-49
Glyur000007s00002771.1	PF05920.6	Homeobox_KN	412	451	7.80E-17

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	50.566
SRR1783600	control	51.023
SRR1783602	moderate drought stress	61.741
SRR1811619	moderate drought stress	61.713

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	83.201
DRR006520	Root Summer glycyrrhizin high producing strain	82.373
DRR006521	Root Winter glycyrrhizin high producing strain	27.555
DRR006522	Root Winter glycyrrhizin high producing strain	26.779
DRR006523	Root Summer glycyrrhizin low producing strain	88.311
DRR006524	Root Summer glycyrrhizin low producing strain	91.073
DRR006525	Leaf Summer glycyrrhizin high producing strain	115.110
DRR006526	Leaf Summer glycyrrhizin high producing strain	114.703

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	51.488
SRR2868004	Drought Stress (root)	68.366
SRR2967015	Control (root)	101.032

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	127.379
SRR9715740	Leaf	117.290
SRR9715741	Leaf	179.827
SRR9715739	Root	18.090
SRR9715742	Root	98.226
SRR9715743	Root	75.835

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	22.326
SRR8749028	MeJA induced 9h	60.451
SRR8749029	MeJA induced 9h	26.369
SRR8749030	Uninduced	30.323
SRR8749031	Uninduced	21.871
SRR8749032	Uninduced	14.502

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	111.006
SRR8400027	Control - Root	89.236