Gene detail information of Glyur000007s00002770 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G05675.2 | 4.00E-155 | BTB/POZ domain-containing protein |
| NR | XP_003521497.1 | 0 | PREDICTED: BTB/POZ domain-containing protein At3g05675-like isoform X1 [Glycine max] |
| Swissprot | tr|Q8RX01|Y3567_ARATH | 0 | BTB/POZ domain-containing protein At3g05675 |
| trEMBL | tr|I1JQ93|I1JQ93_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA03G36080.5} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00007 | 16172 | 19164 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 10.849 |
| SRR1783600 | control | 10.725 |
| SRR1783602 | moderate drought stress | 11.764 |
| SRR1811619 | moderate drought stress | 11.502 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 12.803 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 12.671 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 9.257 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 8.961 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 10.912 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 10.860 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 9.746 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 9.887 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 21.815 |
| SRR2868004 | Drought Stress (root) | 22.669 |
| SRR2967015 | Control (root) | 25.605 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 13.595 |
| SRR9715740 | Leaf | 14.588 |
| SRR9715741 | Leaf | 16.116 |
| SRR9715739 | Root | 3.790 |
| SRR9715742 | Root | 7.948 |
| SRR9715743 | Root | 5.965 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 13.203 |
| SRR8749028 | MeJA induced 9h | 9.384 |
| SRR8749029 | MeJA induced 9h | 6.151 |
| SRR8749030 | Uninduced | 5.425 |
| SRR8749031 | Uninduced | 2.830 |
| SRR8749032 | Uninduced | 3.076 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 20.629 |
| SRR8400027 | Control - Root | 22.116 |