Gene detail information of Glyur000006s00001723 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G06250.1 | 6.00E-55 | alpha/beta-Hydrolases superfamily protein |
| NR | XP_004505132.1 | 2.21E-101 | PREDICTED: phospholipase A1-IIgamma-like isoform X1 [Cicer arietinum] |
| Swissprot | tr|Q9LNC2|PLA18_ARATH | 7.00E-65 | Phospholipase A1-IIalpha |
| trEMBL | tr|V7C8W8|V7C8W8_PHAVU | 4.00E-99 | Uncharacterized protein {ECO:0000313|EMBL:ESW25700.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00006 | 723447 | 725937 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000006s00001723.1 | PF01764.20 | Lipase_3 | 135 | 190 | 3.00E-05 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.354 |
| SRR1783600 | control | 0.286 |
| SRR1783602 | moderate drought stress | 0.049 |
| SRR1811619 | moderate drought stress | 0.105 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.009 |
| SRR2868004 | Drought Stress (root) | 27.405 |
| SRR2967015 | Control (root) | 17.851 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.483 |
| SRR8749028 | MeJA induced 9h | 1.247 |
| SRR8749029 | MeJA induced 9h | 0.040 |
| SRR8749030 | Uninduced | 4.264 |
| SRR8749031 | Uninduced | 11.634 |
| SRR8749032 | Uninduced | 0.979 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.595 |
| SRR8400027 | Control - Root | 0.800 |