Gene detail information of Glyur000006s00001712 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G30720.1 | 1.00E-156 | Thioesterase/thiol ester dehydrase-isomerase superfamily protein |
| NR | XP_004505139.1 | 0 | PREDICTED: acyl-coenzyme A thioesterase 9, mitochondrial-like [Cicer arietinum] |
| COG | YP_002490986.1 | 9.00E-21 | thioesterase superfamily protein [Anaeromyxobacter dehalogenans 2CP-1] |
| trEMBL | tr|G7JPP9|G7JPP9_MEDTR | 0 | Acyl-CoA thioesterase, putative {ECO:0000313|EMBL:AES90324.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00006 | 668129 | 672457 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000006s00001712.1 | PF03061.17 | 4HBT | 328 | 393 | 4.20E-05 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.015 |
| SRR1783600 | control | 7.008 |
| SRR1783602 | moderate drought stress | 4.126 |
| SRR1811619 | moderate drought stress | 4.025 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.964 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.853 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.731 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.715 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.342 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.194 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.335 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.085 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.158 |
| SRR2868004 | Drought Stress (root) | 5.313 |
| SRR2967015 | Control (root) | 6.226 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.327 |
| SRR9715740 | Leaf | 5.980 |
| SRR9715741 | Leaf | 3.692 |
| SRR9715739 | Root | 0.843 |
| SRR9715742 | Root | 2.719 |
| SRR9715743 | Root | 2.011 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.220 |
| SRR8749028 | MeJA induced 9h | 2.727 |
| SRR8749029 | MeJA induced 9h | 1.162 |
| SRR8749030 | Uninduced | 0.489 |
| SRR8749031 | Uninduced | 0.271 |
| SRR8749032 | Uninduced | 0.114 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.457 |
| SRR8400027 | Control - Root | 6.162 |