Gene detail

Gene detail information of Glyur000006s00001696

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G59690.1	5.00E-94	IQ-domain 13
NR	XP_004505151.1	0	PREDICTED: protein IQ-DOMAIN 14-like isoform X1 [Cicer arietinum]
Swissprot	tr\|Q8LPG9\|IQD14_ARATH	7.00E-119	Protein IQ-DOMAIN 14
trEMBL	tr\|G7JNM9\|G7JNM9_MEDTR	0	IQ calmodulin-binding motif protein {ECO:0000313\|EMBL:AES90277.1}

Sequence

Transcript Sequence

>Glyur000006s00001696.1
ATGTTGGTGAGGTAGCAATAATGAAAGCTAGAATAGAATTAATAAGGAAGTAGAGANAAATAGTTAAGAGTACCAAACACAACCGTTTATAATTAAGTGGCCATGGAAATTCTTTTTGCGTAGGTCACAGTCTTCCCATTGAAGTAAAGTTGGTTGAAGTTGTCCACATTGAGTGAGAAAGTGGCCAACCAGCCCCTCTATTTCTCTTTCCTCTCATCATCATCATTATGGAACCAAAAAGAAAGTAATAGTAAATTATATAAATCCCACAAAAACAAAGGAGAGGAGAAAAAAAATTATAATTATAAATCCCATAAAAGGTGAAAGGTTGCTAGCTAGAGGAAAAGTAACTTCATAAATCATCATCATCATACATACAAGCCAAGGGAATTGGATTCCAAGGGAGAGATAGAGAGAGAAGTTAATATTTTGAGATAGCCAGCGAAGGAGGAAGAATCATGTGGTGCTGGAAAGGAGAGGGAGGCTAGAAAAAGAGCTAGAGAGAGAGAGAGAGAGAGAGAGGGGTTTTCCTCTGCTTTGCTCTGTTCTGTGCCTTTGACAGCACTTTTAGGAGTTTCTTGCTCTGCCAACCAACAAGCCTGAAACTAAAATAGAGATGCTGCCTCCTTGCTGGCGATCGTTCTGGAAGAAACAGTAATGCTACTGAGATGGGAAAGAAGGGGAGTTGGTTTTCTGCAATCAAGAGGGTTTTCACGCACTACTCCAAGGGGAAGCAGGACTCAGATAACAAAAACACAAAAGAAAAGAAGAAAGGCCTAGGAAAACTAAAGCATGGAGAGACCAACTCTTTCATCCCCCTCTTCAGAGAGCCAAGCAGCATTGAGAAAATATTTGGGGACTTTGAAAGAGAGCAACAACAACAACAACAACTGGTCGTAAGGCCTCCCACACCTCCTGAGCTACCAAAAACGCCACCTGTTGTCCCTCCTAGACCTCCTTCTCCTAGACCTCCTTCTCCAAGGGCTTCTTCACCAAGGGCTCCATCTCCGAGGGCTGCTTCTCCACGAGTTACCTCCCCCAAAGCTGCATCTTCCCGGAATGTTCATCACCACAAGGAGGTTGGCCACAGACCAGAACCAACTTTAAGGAACCAGCATGCCTCAGCTACTAAGATCCAGGCTGCCTACAGAGGTTACATGGCCAGGAGGAGTTTTAGAGCTTTGAAGGGACTGGTAAGGCTTCAAGGAGTGGTAAGAGGACAGAATGTGAAGAGGCAGACAGTTAATGCGATGAAACACATGCAGCTATTGGTGCGAGTTCAATCTCAGATTCAGTCTCGAAGGATCCAGATGTTGGAAAACCAGGCACGATATCAAGCTGAGTTCAAGAATGCTGCAAGTNCCTTGGGCAAAACTTCTGAGGCGGGTAACAATGAAGATTGGGATGATAGCTTACTGACAAAAGAGGAAATAGAGGCAAGGTTGCAGAGGAAAGTGGAAGCAATCATCAAAAGAGAAAGAGCAATGGCATTTGCATATTCACATCAGTTGTGGAAAGCCACTCCAAAATCAACCCAAACNCCAGTGACAGATATCCGATCCGGTGGATTCCCGTGGTGGTGGAACTGGTTGGAAAGACAACTGCCAGCAGCAAATCCACAAGAAGGACAAGTCCCAAAGAGTTTTCACCTCACACCTCCAAGACCATATTCAGAACAGAAGACAAGTCCAAGACCTGCCTCAAGCAGCACTCAAAGGCAGCAGCATCACTTTGCCTTTGATAACATGGACACACCAACTCCAAAATCCACAAAATCAACCATATTCCCATCTTCAAGACCGCCCAGAACTCCCCCATTTAGAACTCCACAAGCAAACAGCTCGAGCACATCGTCGAAACATCCAAGGCCAACAAGGGGTGCTGCTGTGGGAGCCAATTCGCCTTTCGACGTGCCACTGAAGGATGATGAGAGTCTCACAAGCTGCCCACCATTTTCAGTGCCAAACTACATGGCTCCAACAGTTTCTGCAAAGGCCAAAGTACGTGCTAGTAGTAACCCCAGAGAAAGGTCTTTTGGTAGTGCTNGTAGTGTTGGTGGTGGGACTCCAAACAGTGATTCAAGGAGGAGACTTTCATTCCCTCTGCCACAGGGAATTGGGTCTTTCAAATGGGCCAAAGGGTCCTTGTTCTCTAGCAACAAGGATCCTGTTCCTAGCTCTCACAACAGGACACCAGATAACTACCAGTCACTTGAGTCTTTAGGAAACGTGAGTGTGGACTCAACGGTATCTTTGCCCGCAAGGGTTGGGAGAAAGCCTTTTACAAGATTTGTGTGATTTTATATTCTTTTTAACCATTTTTATTATTTTGTCCCTATGTTGGTTGGTGGTGTTATTGTCAGTTATGAATGGTTATGACTATGATGATCGAGTGTATTGGTGTTGATACTTGATAGTTTGACAGAGGTATACCAGTTGTAAACTAATAAAAACATAATAGCAAAT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00006	577876	584418	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function
GO:0005515 protein binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000006s00001696.1	PF00612.22	IQ	150	170	2.90E-06
Glyur000006s00001696.1	PF13178.1	DUF4005	386	481	5.00E-14
Glyur000006s00001696.2	PF00612.22	IQ	149	169	2.90E-06
Glyur000006s00001696.2	PF13178.1	DUF4005	385	480	5.00E-14

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	63.433
SRR1783600	control	63.176
SRR1783602	moderate drought stress	78.220
SRR1811619	moderate drought stress	77.482

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	91.105
DRR006520	Root Summer glycyrrhizin high producing strain	89.783
DRR006521	Root Winter glycyrrhizin high producing strain	248.565
DRR006522	Root Winter glycyrrhizin high producing strain	241.485
DRR006523	Root Summer glycyrrhizin low producing strain	182.883
DRR006524	Root Summer glycyrrhizin low producing strain	183.484
DRR006525	Leaf Summer glycyrrhizin high producing strain	73.226
DRR006526	Leaf Summer glycyrrhizin high producing strain	73.003

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	214.206
SRR2868004	Drought Stress (root)	239.719
SRR2967015	Control (root)	265.842

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	97.098
SRR9715740	Leaf	121.603
SRR9715741	Leaf	95.068
SRR9715739	Root	16.329
SRR9715742	Root	84.376
SRR9715743	Root	67.307

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	187.799
SRR8749028	MeJA induced 9h	337.030
SRR8749029	MeJA induced 9h	339.953
SRR8749030	Uninduced	456.213
SRR8749031	Uninduced	617.567
SRR8749032	Uninduced	383.881

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	166.541
SRR8400027	Control - Root	153.173