Gene detail information of Glyur000006s00001682 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G23530.1 | 3.00E-57 | Zinc-finger domain of monoamine-oxidase A repressor R1 |
| NR | XP_003608058.1 | 1.06E-122 | Cell division cycle-associated 7-like protein [Medicago truncatula] |
| trEMBL | tr|G7JNK7|G7JNK7_MEDTR | 4.00E-123 | Zinc-finger of monoamine-oxidase A repressor R1 {ECO:0000313|EMBL:AES90255.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00006 | 496362 | 499126 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000006s00001682.1 | PF10497.4 | zf-4CXXC_R1 | 175 | 272 | 4.80E-28 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.416 |
| SRR1783600 | control | 1.439 |
| SRR1783602 | moderate drought stress | 6.593 |
| SRR1811619 | moderate drought stress | 6.685 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.373 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.337 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 11.932 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 11.059 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.978 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.827 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.370 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.293 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.600 |
| SRR2868004 | Drought Stress (root) | 1.635 |
| SRR2967015 | Control (root) | 2.349 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.682 |
| SRR9715740 | Leaf | 2.148 |
| SRR9715741 | Leaf | 2.386 |
| SRR9715739 | Root | 0.686 |
| SRR9715742 | Root | 0.974 |
| SRR9715743 | Root | 1.526 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 11.930 |
| SRR8749028 | MeJA induced 9h | 5.957 |
| SRR8749029 | MeJA induced 9h | 7.596 |
| SRR8749030 | Uninduced | 1.958 |
| SRR8749031 | Uninduced | 0.802 |
| SRR8749032 | Uninduced | 0.736 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.202 |
| SRR8400027 | Control - Root | 2.719 |