Gene detail information of Glyur000006s00001680 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G15890.1 | 2.00E-53 | maternal effect embryo arrest 14 |
| NR | NP_001237958.1 | 4.37E-114 | uncharacterized protein LOC100305614 [Glycine max] |
| trEMBL | tr|C6SVW7|C6SVW7_SOYBN | 2.00E-114 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G15430.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00006 | 480104 | 481928 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 163.048 |
| SRR1783600 | control | 163.671 |
| SRR1783602 | moderate drought stress | 258.439 |
| SRR1811619 | moderate drought stress | 258.029 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 171.432 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 169.378 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1272.579 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1239.883 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 698.302 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 697.381 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 171.968 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 171.150 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 35.092 |
| SRR2868004 | Drought Stress (root) | 104.671 |
| SRR2967015 | Control (root) | 222.752 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 46.064 |
| SRR9715740 | Leaf | 82.879 |
| SRR9715741 | Leaf | 90.424 |
| SRR9715739 | Root | 26.337 |
| SRR9715742 | Root | 56.350 |
| SRR9715743 | Root | 51.532 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 78.936 |
| SRR8749028 | MeJA induced 9h | 377.283 |
| SRR8749029 | MeJA induced 9h | 414.166 |
| SRR8749030 | Uninduced | 87.385 |
| SRR8749031 | Uninduced | 763.631 |
| SRR8749032 | Uninduced | 639.273 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 66.575 |
| SRR8400027 | Control - Root | 75.476 |