Gene detail information of Glyur000006s00001669


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G19050.10phragmoplast orienting kinesin 2
NRXP_006575019.10PREDICTED: phragmoplast orienting kinesin 2-like [Glycine max]
COGYP_004781659.11.00E-07SMC domain containing protein [Pyrolobus fumarii 1A]
Swissprottr|Q27IK6|POK2_ARATH0Phragmoplast orienting kinesin 2
trEMBLtr|I1JEX7|I1JEX7_SOYBN0Kinesin-like protein {ECO:0000256|RuleBase:RU000394}

Sequence

Transcript Sequence
Protein Sequence


Location information (JBrowse)

ScaffoldStartEndStrand
Scaffold00006425716439985-


Gene family

Gene familysubfamily
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KEGG pathway

KOEnzymeEnzyme IDpathwaymapID
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Gene Ontology

biological_process

GO:0007018  microtubule-based movement


cellular_component

GO:0005871  kinesin complex


molecular_function

GO:0003777  microtubule motor activity

GO:0005524  ATP binding

GO:0008017  microtubule binding

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000006s00001669.1PF00225.18Kinesin2045357.30E-110
Glyur000006s00001669.1PF12711.2Kinesin-relat_16767611.80E-30


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2.313
SRR1783600control2.308
SRR1783602moderate drought stress2.098
SRR1811619moderate drought stress2.097

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain2.458
DRR006520Root Summer glycyrrhizin high producing strain2.399
DRR006521Root Winter glycyrrhizin high producing strain0.228
DRR006522Root Winter glycyrrhizin high producing strain0.234
DRR006523Root Summer glycyrrhizin low producing strain0.692
DRR006524Root Summer glycyrrhizin low producing strain0.705
DRR006525Leaf Summer glycyrrhizin high producing strain0.614
DRR006526Leaf Summer glycyrrhizin high producing strain0.604

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress (root)11.224
SRR2868004Drought Stress (root)4.875
SRR2967015Control (root)5.609

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leaf1.100
SRR9715740Leaf0.091
SRR9715741Leaf0.330
SRR9715739Root0.105
SRR9715742Root0.284
SRR9715743Root0.273

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h7.312
SRR8749028MeJA induced 9h5.149
SRR8749029MeJA induced 9h4.603
SRR8749030Uninduced0.186
SRR8749031Uninduced0.248
SRR8749032Uninduced0.404

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment - Root8.308
SRR8400027Control - Root7.561